Aliases for RPL6P25 Gene

Aliases for RPL6P25 Gene

  • Ribosomal Protein L6 Pseudogene 25 2 3 5
  • RPL6_15_1263 3
  • RPL6P25 5

External Ids for RPL6P25 Gene

Previous GeneCards Identifiers for RPL6P25 Gene

  • GC12P082069
  • GC12P083546

Summaries for RPL6P25 Gene

GeneCards Summary for RPL6P25 Gene

RPL6P25 (Ribosomal Protein L6 Pseudogene 25) is a Pseudogene.

Additional gene information for RPL6P25 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL6P25 Gene

Genomics for RPL6P25 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL6P25 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J083149 Enhancer 0.7 Ensembl 250.7 -0.9 -910 1.2 NCOR1 CEBPB SMAD5 TBP TAL1 ZNF316 STAT5A MAFG EGR1 ZBTB33 RPL6P25 lnc-TMTC2-2 HSALNG0092753 TMTC2
GH12J083150 Enhancer 0.2 Ensembl 250.7 +1.1 1090 1.2 RPL6P25 lnc-TMTC2-2 HSALNG0092754 TMTC2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL6P25 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL6P25 Gene

Latest Assembly
910 bases
Plus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
910 bases
Plus strand

(GRCh37/hg19 by Ensembl)
860 bases
Plus strand

Genomic View for RPL6P25 Gene

Genes around RPL6P25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P25 Gene

Proteins for RPL6P25 Gene

Post-translational modifications for RPL6P25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P25 Gene

Domains & Families for RPL6P25 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL6P25 Gene

Function for RPL6P25 Gene

Phenotypes From GWAS Catalog for RPL6P25 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P25 Gene

Localization for RPL6P25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL6P25 Gene

Pathways & Interactions for RPL6P25 Gene

PathCards logo

SuperPathways for RPL6P25 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL6P25 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL6P25 Gene

Drugs & Compounds for RPL6P25 Gene

No Compound Related Data Available

Transcripts for RPL6P25 Gene

mRNA/cDNA for RPL6P25 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P25 Gene

No ASD Table

Relevant External Links for RPL6P25 Gene

GeneLoc Exon Structure for

Expression for RPL6P25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL6P25 Gene

genes like me logo Genes that share expression patterns with RPL6P25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P25 Gene

Orthologs for RPL6P25 Gene

Evolution for RPL6P25 Gene

Gene Tree for RPL6P25 (if available)
Gene Tree for RPL6P25 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPL6P25

No data available for Orthologs for RPL6P25 Gene

Paralogs for RPL6P25 Gene

No data available for Paralogs for RPL6P25 Gene

Variants for RPL6P25 Gene

Additional Variant Information for RPL6P25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P25 Gene

Disorders for RPL6P25 Gene

No disorders were found for RPL6P25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL6P25 Gene

Publications for RPL6P25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3
  3. The neuronal transporter gene SLC6A15 confers risk to major depression. (PMID: 21521612) Kohli MA … Binder EB (Neuron 2011) 40
  4. Identification of candidate loci at 6p21 and 21q22 in a genome-wide association study of cardiac manifestations of neonatal lupus. (PMID: 20662065) Clancy RM … Buyon JP (Arthritis and rheumatism 2010) 40
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 40

Products for RPL6P25 Gene

Sources for RPL6P25 Gene