Aliases for RPL6P18 Gene

Aliases for RPL6P18 Gene

  • Ribosomal Protein L6 Pseudogene 18 2 3
  • Ribosomal Protein L6 (RPL6) Pseudogene 5
  • RPL6_13_667 3
  • AL591416.1 5

External Ids for RPL6P18 Gene

Previous GeneCards Identifiers for RPL6P18 Gene

  • GC06P023213

Summaries for RPL6P18 Gene

GeneCards Summary for RPL6P18 Gene

RPL6P18 (Ribosomal Protein L6 Pseudogene 18) is a Pseudogene.

Additional gene information for RPL6P18 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL6P18 Gene

Genomics for RPL6P18 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL6P18 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J023097 Enhancer 0.2 ENCODE 0.7 -4.9 -4920 1.1 RPL6P18 HSALNG0048574 LOC105374974 ENSG00000233358 HDGFL1
GH06J023084 Enhancer 0.2 Ensembl 0.4 -18.0 -17958 0.2 HSALNG0048574 RPL6P18 ENSG00000233358 LOC105374974 HDGFL1
GH06J023087 Enhancer 0.2 Ensembl 0.4 -15.1 -15058 0.4 HSALNG0048574 RPL6P18 ENSG00000233358 LOC105374974 HDGFL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL6P18 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL6P18 Gene

Latest Assembly
chr6:23,102,659-23,103,577
(GRCh38/hg38)
Size:
919 bases
Orientation:
Plus strand

Previous Assembly
chr6:23,102,887-23,103,805
(GRCh37/hg19 by Entrez Gene)
Size:
919 bases
Orientation:
Plus strand

chr6:23,102,908-23,103,774
(GRCh37/hg19 by Ensembl)
Size:
867 bases
Orientation:
Plus strand

Genomic View for RPL6P18 Gene

Genes around RPL6P18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P18 Gene

Proteins for RPL6P18 Gene

Post-translational modifications for RPL6P18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P18 Gene

Domains & Families for RPL6P18 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL6P18 Gene

Function for RPL6P18 Gene

Phenotypes From GWAS Catalog for RPL6P18 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P18 Gene

Localization for RPL6P18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL6P18 Gene

Pathways & Interactions for RPL6P18 Gene

PathCards logo

SuperPathways for RPL6P18 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL6P18 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL6P18 Gene

Drugs & Compounds for RPL6P18 Gene

No Compound Related Data Available

Transcripts for RPL6P18 Gene

mRNA/cDNA for RPL6P18 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P18 Gene

No ASD Table

Relevant External Links for RPL6P18 Gene

GeneLoc Exon Structure for
RPL6P18

Expression for RPL6P18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL6P18 Gene

genes like me logo Genes that share expression patterns with RPL6P18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P18 Gene

Orthologs for RPL6P18 Gene

Evolution for RPL6P18 Gene

ENSEMBL:
Gene Tree for RPL6P18 (if available)
TreeFam:
Gene Tree for RPL6P18 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPL6P18

No data available for Orthologs for RPL6P18 Gene

Paralogs for RPL6P18 Gene

No data available for Paralogs for RPL6P18 Gene

Variants for RPL6P18 Gene

Additional Variant Information for RPL6P18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P18
Leiden Open Variation Database (LOVD)
RPL6P18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P18 Gene

Disorders for RPL6P18 Gene

No disorders were found for RPL6P18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL6P18 Gene

Publications for RPL6P18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Whole genome association scan for genetic polymorphisms influencing information processing speed. (PMID: 21130836) Luciano M … Deary IJ (Biological psychology 2011) 40
  3. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 40
  4. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 40
  5. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 40

Products for RPL6P18 Gene

Sources for RPL6P18 Gene