RPL6P13 Gene (Pseudogene)

Ribosomal Protein L6 Pseudogene 13

GC04P086870
GIFtS:
5
See more...

Aliases for RPL6P13 Gene

Aliases for RPL6P13 Gene

  • Ribosomal Protein L6 Pseudogene 13 2 3
  • RPL6_10_498 3

External Ids for RPL6P13 Gene

Previous GeneCards Identifiers for RPL6P13 Gene

  • GC04P088011
  • GC04P087792

Summaries for RPL6P13 Gene

GeneCards Summary for RPL6P13 Gene

RPL6P13 (Ribosomal Protein L6 Pseudogene 13) is a Pseudogene.

Additional gene information for RPL6P13 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL6P13 Gene

Genomics for RPL6P13 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPL6P13 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH04J086870 Enhancer 0.3 Ensembl 600.7 +0.9 936 0.2 MLLT1 ENSG00000243312 RPL6P13 lnc-PTPN13-1 AFF1 ENSG00000250202 lnc-AFF1-3 SLC10A6 C4orf36
GH04J086855 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -13.6 -13564 3.2 FOXA1 CTCF CTBP1 ZNF217 GATA3 DPF2 STAT1 JUND STAT3 RAD21 C4orf36 AFF1 SLC10A6 RPL6P13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL6P13 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL6P13 Gene

Genomic Locations for RPL6P13 Gene
chr4:86,870,165-86,871,433
(GRCh38/hg38)
Size:
1,269 bases
Orientation:
Plus strand
chr4:87,791,318-87,792,586
(GRCh37/hg19)
Size:
1,269 bases
Orientation:
Plus strand

Genomic View for RPL6P13 Gene

Genes around RPL6P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P13 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL6P13 Gene

Proteins for RPL6P13 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL6P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P13 Gene

Domains & Families for RPL6P13 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL6P13 Gene

Function for RPL6P13 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P13 Gene

Localization for RPL6P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL6P13 Gene

Pathways & Interactions for RPL6P13 Gene

PathCards logo

SuperPathways for RPL6P13 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL6P13 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL6P13 Gene

Drugs & Compounds for RPL6P13 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL6P13 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P13 Gene

No ASD Table

Relevant External Links for RPL6P13 Gene

GeneLoc Exon Structure for
RPL6P13

No data available for mRNA/cDNA for RPL6P13 Gene

Expression for RPL6P13 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL6P13 Gene

mRNA expression in normal human tissues for RPL6P13 Gene
mRNA expression by GTEx for RPL6P13 Gene
genes like me logo Genes that share expression patterns with RPL6P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P13 Gene

Orthologs for RPL6P13 Gene

No data available for Orthologs and Evolution for RPL6P13 Gene

Paralogs for RPL6P13 Gene

No data available for Paralogs for RPL6P13 Gene

Variants for RPL6P13 Gene

Additional Variant Information for RPL6P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P13 Gene

Disorders for RPL6P13 Gene

No disorders were found for RPL6P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL6P13 Gene

Publications for RPL6P13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

ExternalLinks

View latest publications for RPL6P13 gene in Mastermind

Products for RPL6P13 Gene

Sources for RPL6P13 Gene