Aliases for RPL6P12 Gene

Aliases for RPL6P12 Gene

  • Ribosomal Protein L6 Pseudogene 12 2 3 5
  • RPL6_11_535 3
  • RPL6P12 5

External Ids for RPL6P12 Gene

Previous GeneCards Identifiers for RPL6P12 Gene

  • GC04U901028
  • GC04P170088
  • GC04P165841

Summaries for RPL6P12 Gene

GeneCards Summary for RPL6P12 Gene

RPL6P12 (Ribosomal Protein L6 Pseudogene 12) is a Pseudogene.

Additional gene information for RPL6P12 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL6P12 Gene

Genomics for RPL6P12 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL6P12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J169163 Enhancer 0.9 Ensembl ENCODE dbSUPER 600.7 -1.9 -1853 3.2 ZNF600 ZBTB20 ZXDB OSR2 WT1 ZNF189 PRDM4 JUND ZNF843 FEZF1 RPL6P12 lnc-PALLD-4 SH3RF1 ENSG00000251171 LOC105377527 CBR4
GH04J169166 Enhancer 0.3 Ensembl dbSUPER 600.7 +0.3 347 0.4 RPL6P12 lnc-PALLD-4 SH3RF1 ENSG00000251171 piR-45035-144 CBR4
GH04J169156 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE dbSUPER 0.4 -6.8 -6795 6.3 ATF7 PRDM1 ZNF600 JUND NFE2 ATF2 NR2F2 FEZF1 ATF3 JUN SH3RF1 ENSG00000251171 RPL6P12 LOC105377527 CBR4
GH04J169147 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -16.9 -16853 5.6 JUND CEBPB ZNF316 FOXA2 JUN MAFF MAFK BHLHE40 MAX EMSY SH3RF1 ENSG00000251171 RPL6P12 LOC105377527 CBR4
GH04J169133 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 -31.9 -31853 1.6 CREB1 FOXA1 RFX1 FOXA2 YY1 ZNF592 GATA3 HNF4A RXRA NRF1 SH3RF1 ENSG00000251171 RPL6P12 LOC105377527 CBR4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL6P12 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL6P12 Gene

Genomic Locations for RPL6P12 Gene
chr4:169,166,254-169,167,152
(GRCh38/hg38)
Size:
899 bases
Orientation:
Plus strand
chr4:170,087,405-170,088,297
(GRCh37/hg19)
Size:
893 bases
Orientation:
Plus strand

Genomic View for RPL6P12 Gene

Genes around RPL6P12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P12 Gene

Proteins for RPL6P12 Gene

Post-translational modifications for RPL6P12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P12 Gene

Domains & Families for RPL6P12 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL6P12 Gene

Function for RPL6P12 Gene

Phenotypes From GWAS Catalog for RPL6P12 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P12 Gene

Localization for RPL6P12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL6P12 Gene

Pathways & Interactions for RPL6P12 Gene

PathCards logo

SuperPathways for RPL6P12 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL6P12 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL6P12 Gene

Drugs & Compounds for RPL6P12 Gene

No Compound Related Data Available

Transcripts for RPL6P12 Gene

mRNA/cDNA for RPL6P12 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P12 Gene

No ASD Table

Relevant External Links for RPL6P12 Gene

GeneLoc Exon Structure for
RPL6P12

Expression for RPL6P12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL6P12 Gene

genes like me logo Genes that share expression patterns with RPL6P12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P12 Gene

Orthologs for RPL6P12 Gene

Evolution for RPL6P12 Gene

ENSEMBL:
Gene Tree for RPL6P12 (if available)
TreeFam:
Gene Tree for RPL6P12 (if available)

No data available for Orthologs for RPL6P12 Gene

Paralogs for RPL6P12 Gene

No data available for Paralogs for RPL6P12 Gene

Variants for RPL6P12 Gene

Additional Variant Information for RPL6P12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P12 Gene

Disorders for RPL6P12 Gene

Additional Disease Information for RPL6P12

Genetic Association Database
(GAD)

No disorders were found for RPL6P12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL6P12 Gene

Publications for RPL6P12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL6P12 Gene

Products for RPL6P12 Gene

Sources for RPL6P12 Gene