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Aliases for RPL5P28 Gene

Aliases for RPL5P28 Gene

  • Ribosomal Protein L5 Pseudogene 28 2 3 5
  • RPL5_11_1110 3

External Ids for RPL5P28 Gene

Previous GeneCards Identifiers for RPL5P28 Gene

  • GC10M134809
  • GC10M134957

Summaries for RPL5P28 Gene

GeneCards Summary for RPL5P28 Gene

RPL5P28 (Ribosomal Protein L5 Pseudogene 28) is a Pseudogene.

Additional gene information for RPL5P28 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL5P28 Gene

Genomics for RPL5P28 Gene

GeneHancer (GH) Regulatory Elements for RPL5P28 Gene

Promoters and enhancers for RPL5P28 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I133142 Enhancer 1.2 Ensembl ENCODE 550.8 +1.6 1609 1.6 PKNOX1 ATF1 ZNF2 TCF12 GLIS2 ZNF213 GATA2 FOS ATF7 SP3 GC10M133145 RPL5P28 KNDC1 PIR56333
GH10I133145 Enhancer 0.4 ENCODE 550.8 -0.4 -352 0.2 CTBP1 JUND FOS GC10M133145 RPL5P28 KNDC1 CFAP46 ENSG00000235245
GH10I133160 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 0.4 -15.1 -15051 0.8 ZNF777 ZNF449 SIN3A ZIC2 ZNF335 ZFHX2 GLIS2 PATZ1 VEZF1 ZBTB20 KNDC1 RPL5P28
GH10I133158 Enhancer 0.7 ENCODE 0.4 -13.8 -13805 1.7 CTCF PKNOX1 ZNF777 ZNF792 ZIC2 ZKSCAN1 ZNF335 ZFHX2 GLIS2 ZBTB48 KNDC1 ENSG00000235245 TUBGCP2 CFAP46 SCART1 RPL5P28
GH10I133150 Enhancer 0.6 ENCODE 0.4 -6.3 -6307 2.1 BCOR HDAC2 RNF2 POLR2A ZNF580 MNT KDM1A GLI4 KNDC1 ADGRA1 ZNF511 TUBGCP2 NKX6-2 RPL5P28
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL5P28 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL5P28 Gene

Genomic Locations for RPL5P28 Gene
1,844 bases
Minus strand

Genomic View for RPL5P28 Gene

Genes around RPL5P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P28 Gene

Proteins for RPL5P28 Gene

Post-translational modifications for RPL5P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P28 Gene

Domains & Families for RPL5P28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL5P28 Gene

Function for RPL5P28 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P28 Gene

Localization for RPL5P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL5P28 Gene

Pathways & Interactions for RPL5P28 Gene

SuperPathways for RPL5P28 Gene

No Data Available

Interacting Proteins for RPL5P28 Gene

Gene Ontology (GO) - Biological Process for RPL5P28 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL5P28 Gene

Drugs & Compounds for RPL5P28 Gene

No Compound Related Data Available

Transcripts for RPL5P28 Gene

mRNA/cDNA for RPL5P28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P28 Gene

No ASD Table

Relevant External Links for RPL5P28 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL5P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL5P28 Gene

mRNA differential expression in normal tissues according to GTEx for RPL5P28 Gene

This gene is overexpressed in Brain - Cerebellum (x8.2), Brain - Cerebellar Hemisphere (x7.7), and Pituitary (x6.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL5P28 Gene:

genes like me logo Genes that share expression patterns with RPL5P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL5P28 Gene

Orthologs for RPL5P28 Gene

Evolution for RPL5P28 Gene

Gene Tree for RPL5P28 (if available)
Gene Tree for RPL5P28 (if available)

No data available for Orthologs for RPL5P28 Gene

Paralogs for RPL5P28 Gene

No data available for Paralogs for RPL5P28 Gene

Variants for RPL5P28 Gene

Additional Variant Information for RPL5P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P28 Gene

Disorders for RPL5P28 Gene

No disorders were found for RPL5P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P28 Gene

Publications for RPL5P28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL5P28 Gene

Sources for RPL5P28 Gene

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