Aliases for RPL5P26 Gene

Aliases for RPL5P26 Gene

  • Ribosomal Protein L5 Pseudogene 26 2 3 5
  • RPL5_13_1059 3
  • RPL5P26 5

External Ids for RPL5P26 Gene

Previous GeneCards Identifiers for RPL5P26 Gene

  • GC10U901114
  • GC10P071540

Summaries for RPL5P26 Gene

GeneCards Summary for RPL5P26 Gene

RPL5P26 (Ribosomal Protein L5 Pseudogene 26) is a Pseudogene.

Additional gene information for RPL5P26 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL5P26 Gene

Genomics for RPL5P26 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL5P26 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J069757 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -21.0 -20989 1.8 ZNF580 ZIC2 NFIC ZNF341 SMARCA5 ZNF571 ZNF624 ZBTB48 ZNF189 LCORL DDX50 CEP57L1P1 COL13A1 FAM241B PALD1 TSPAN15 RPL5P26 HSALNG0078604
GH10J069768 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -9.7 -9689 2.8 ZNF600 JUND ZIC2 CEBPB ZEB1 TEAD3 FOSL2 ZNF189 GLIS1 ZNF398 RPL5P26 COL13A1 HSALNG0078605 HSALNG0078604 FAM241B
GH10J069727 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -46.4 -46390 9.8 MYC ZIC2 HES1 BHLHE40 NBN RUNX1 RARA ZNF316 NFE2 RAD21 TYSND1 HSALNG0078604 RPL5P26 COL13A1 FAM241B
GH10J069766 Enhancer 0.7 Ensembl ENCODE CraniofacialAtlas 0.4 -12.5 -12467 1.2 REST MNT RPL5P26 COL13A1 HSALNG0078604 FAM241B
GH10J069748 Enhancer 0.7 Ensembl CraniofacialAtlas dbSUPER 0.3 -28.7 -28689 3.6 ZMYM3 FOS COL13A1 RPL5P26 HSALNG0078604 FAM241B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL5P26 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL5P26 Gene

Latest Assembly
chr10:69,778,890-69,779,896
(GRCh38/hg38)
Size:
1,007 bases
Orientation:
Plus strand

Previous Assembly
chr10:71,538,646-71,539,652
(GRCh37/hg19 by Entrez Gene)
Size:
1,007 bases
Orientation:
Plus strand

chr10:71,538,718-71,539,594
(GRCh37/hg19 by Ensembl)
Size:
877 bases
Orientation:
Plus strand

Genomic View for RPL5P26 Gene

Genes around RPL5P26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P26 Gene

Proteins for RPL5P26 Gene

Post-translational modifications for RPL5P26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P26 Gene

Domains & Families for RPL5P26 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL5P26 Gene

Function for RPL5P26 Gene

Phenotypes From GWAS Catalog for RPL5P26 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P26 Gene

Localization for RPL5P26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL5P26 Gene

Pathways & Interactions for RPL5P26 Gene

PathCards logo

SuperPathways for RPL5P26 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL5P26 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL5P26 Gene

Drugs & Compounds for RPL5P26 Gene

No Compound Related Data Available

Transcripts for RPL5P26 Gene

mRNA/cDNA for RPL5P26 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P26 Gene

No ASD Table

Relevant External Links for RPL5P26 Gene

GeneLoc Exon Structure for
RPL5P26

Expression for RPL5P26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL5P26 Gene

genes like me logo Genes that share expression patterns with RPL5P26: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL5P26 Gene

Orthologs for RPL5P26 Gene

Evolution for RPL5P26 Gene

ENSEMBL:
Gene Tree for RPL5P26 (if available)
TreeFam:
Gene Tree for RPL5P26 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPL5P26

No data available for Orthologs for RPL5P26 Gene

Paralogs for RPL5P26 Gene

No data available for Paralogs for RPL5P26 Gene

Variants for RPL5P26 Gene

Additional Variant Information for RPL5P26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL5P26
Leiden Open Variation Database (LOVD)
RPL5P26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P26 Gene

Disorders for RPL5P26 Gene

No disorders were found for RPL5P26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P26 Gene

Publications for RPL5P26 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPL5P26 Gene

Sources for RPL5P26 Gene