Aliases for RPL4P4 Gene

Aliases for RPL4P4 Gene

  • Ribosomal Protein L4 Pseudogene 4 2 3 5
  • RPL4_2_444 3

External Ids for RPL4P4 Gene

Previous GeneCards Identifiers for RPL4P4 Gene

  • GC03M186619
  • GC03M185136

Summaries for RPL4P4 Gene

GeneCards Summary for RPL4P4 Gene

RPL4P4 (Ribosomal Protein L4 Pseudogene 4) is a Pseudogene.

Additional gene information for RPL4P4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL4P4 Gene

Genomics for RPL4P4 Gene

GeneHancer (GH) Regulatory Elements for RPL4P4 Gene

Promoters and enhancers for RPL4P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J185418 Promoter 0.7 Ensembl 500.7 +0.2 242 0.8 RXRA REST ID3 SPI1 ZBTB33 MTA2 SP1 MLLT1 YY1 RPL4P4 piR-31026-002 piR-46899-004 MAP3K13
GH03J185931 Promoter/Enhancer 2.7 UCNEbase EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 13.5 -516.2 -516158 7.6 EP300 ZBTB40 ZNF217 SIN3A NRF1 MYC POLR2G NCOR1 BCLAF1 GTF2E2 TRA2B SNORA63B RPS20P14 RPL4P4 SNORA4 TBCCD1 RFC4 SNORA81 CRYGS NMRAL2P
GH03J185678 Enhancer 0.6 Ensembl dbSUPER 12.8 -259.5 -259458 0.2 ZNF316 ZNF791 SETDB1 TRA2B RPL4P4 IGF2BP2-AS1 IGF2BP2 TBCCD1 lnc-LIPH-4 FJ601684-334 lnc-SENP2-1
GH03J185422 Enhancer 0.9 Ensembl ENCODE 0.7 -4.5 -4538 1.6 ZIC2 EP300 CTBP1 NCOR1 ZNF316 NFIC GABPA FOS MAFK CEBPB EPHB3 RPL4P4 RF01210-279 MAP3K13
GH03J185420 Enhancer 0.7 Ensembl ENCODE 0.7 -2.3 -2257 0.6 TCF12 SPI1 GATA3 STAT3 EBF1 IKZF1 FEZF1 POLR2A SP1 PRDM1 RPL4P4 RF01210-279 MAP3K13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL4P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL4P4 Gene

Genomic Locations for RPL4P4 Gene
chr3:185,417,408-185,418,843
(GRCh38/hg38)
Size:
1,436 bases
Orientation:
Minus strand
chr3:185,135,196-185,136,631
(GRCh37/hg19)
Size:
1,436 bases
Orientation:
Minus strand

Genomic View for RPL4P4 Gene

Genes around RPL4P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL4P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL4P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL4P4 Gene

Proteins for RPL4P4 Gene

Post-translational modifications for RPL4P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL4P4 Gene

Domains & Families for RPL4P4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL4P4 Gene

Function for RPL4P4 Gene

Phenotypes From GWAS Catalog for RPL4P4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL4P4 Gene

Localization for RPL4P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL4P4 Gene

Pathways & Interactions for RPL4P4 Gene

PathCards logo

SuperPathways for RPL4P4 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL4P4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL4P4 Gene

Drugs & Compounds for RPL4P4 Gene

No Compound Related Data Available

Transcripts for RPL4P4 Gene

mRNA/cDNA for RPL4P4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL4P4 Gene

No ASD Table

Relevant External Links for RPL4P4 Gene

GeneLoc Exon Structure for
RPL4P4

Expression for RPL4P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL4P4 Gene

genes like me logo Genes that share expression patterns with RPL4P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL4P4 Gene

Orthologs for RPL4P4 Gene

Evolution for RPL4P4 Gene

ENSEMBL:
Gene Tree for RPL4P4 (if available)
TreeFam:
Gene Tree for RPL4P4 (if available)

No data available for Orthologs for RPL4P4 Gene

Paralogs for RPL4P4 Gene

No data available for Paralogs for RPL4P4 Gene

Variants for RPL4P4 Gene

Additional Variant Information for RPL4P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL4P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL4P4 Gene

Disorders for RPL4P4 Gene

No disorders were found for RPL4P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL4P4 Gene

Publications for RPL4P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPL4P4 Gene

Sources for RPL4P4 Gene