Aliases for RPL4P2 Gene

Aliases for RPL4P2 Gene

  • Ribosomal Protein L4 Pseudogene 2 2 3 5
  • RPL4_1_115 3
  • RPL4P2 5

External Ids for RPL4P2 Gene

Previous GeneCards Identifiers for RPL4P2 Gene

  • GC01P164974

Summaries for RPL4P2 Gene

GeneCards Summary for RPL4P2 Gene

RPL4P2 (Ribosomal Protein L4 Pseudogene 2) is a Pseudogene.

Additional gene information for RPL4P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL4P2 Gene

Genomics for RPL4P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL4P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J166705 Enhancer 1 ENCODE 0.3 -41.7 -41704 0.2 LEF1 IKZF1 JUND DDX20 MTA2 PHF21A PKNOX1 ZNF24 MTA1 REST DUTP6 ENSG00000215835 POU2F1 lnc-TADA1-3 RPL4P2 POGK FAM78B
GH01J166703 Enhancer 0.7 ENCODE 0.3 -43.5 -43529 1.2 LEF1 BRD9 DPF2 HDAC1 ETV6 SOX6 FOXJ2 EP300 ZNF766 HMBOX1 DUTP6 lnc-TADA1-3 RPL4P2 POGK FAM78B
GH01J166740 Enhancer 0.2 Ensembl 0.4 -6.3 -6322 0.4 RPL4P2 lnc-TADA1-1 lnc-TADA1-3 POGK FAM78B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL4P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL4P2 Gene

Genomic Locations for RPL4P2 Gene
chr1:166,747,323-166,748,749
(GRCh38/hg38)
Size:
1,427 bases
Orientation:
Plus strand
chr1:166,716,560-166,717,986
(GRCh37/hg19)
Size:
1,427 bases
Orientation:
Plus strand

Genomic View for RPL4P2 Gene

Genes around RPL4P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL4P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL4P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL4P2 Gene

Proteins for RPL4P2 Gene

Post-translational modifications for RPL4P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL4P2 Gene

Domains & Families for RPL4P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL4P2 Gene

Function for RPL4P2 Gene

Phenotypes From GWAS Catalog for RPL4P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL4P2 Gene

Localization for RPL4P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL4P2 Gene

Pathways & Interactions for RPL4P2 Gene

PathCards logo

SuperPathways for RPL4P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL4P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL4P2 Gene

Drugs & Compounds for RPL4P2 Gene

No Compound Related Data Available

Transcripts for RPL4P2 Gene

mRNA/cDNA for RPL4P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL4P2 Gene

No ASD Table

Relevant External Links for RPL4P2 Gene

GeneLoc Exon Structure for
RPL4P2

Expression for RPL4P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL4P2 Gene

genes like me logo Genes that share expression patterns with RPL4P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL4P2 Gene

Orthologs for RPL4P2 Gene

Evolution for RPL4P2 Gene

ENSEMBL:
Gene Tree for RPL4P2 (if available)
TreeFam:
Gene Tree for RPL4P2 (if available)

No data available for Orthologs for RPL4P2 Gene

Paralogs for RPL4P2 Gene

No data available for Paralogs for RPL4P2 Gene

Variants for RPL4P2 Gene

Additional Variant Information for RPL4P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL4P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL4P2 Gene

Disorders for RPL4P2 Gene

Additional Disease Information for RPL4P2

Genetic Association Database
(GAD)

No disorders were found for RPL4P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL4P2 Gene

Publications for RPL4P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 41
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41

No data available for Mastermind for RPL4P2 Gene

Products for RPL4P2 Gene

Sources for RPL4P2 Gene