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Aliases for RPL39P4 Gene
Previous GeneCards Identifiers for RPL39P4 Gene
- GC17U900592
- GC17M037996
Summaries for RPL39P4 Gene
GeneCards Summary for RPL39P4 Gene
RPL39P4 (Ribosomal Protein L39 Pseudogene 4) is a Pseudogene.
Additional gene information for RPL39P4 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL39P4 Gene
Genomics for RPL39P4 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL39P4 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17J039839 | Promoter/Enhancer | 0.5 | EPDnew dbSUPER | 600.7 | 0.0 | -20 | 0.1 | IKZF3 ENSG00000226117 RPL39P4 ZPBP2 LRRC3C ORMDL3 GSDMA GRB7 | ||
| GH17J039842 | Enhancer | 0.7 | ENCODE dbSUPER | 0.7 | -4.1 | -4060 | 1.3 | RNF2 NR2F1 JUNB BATF EBF1 TBL1XR1 EZH2 | GSDMA ZPBP2 IKZF3 LRRC3C ORMDL3 GSDMB RPL39P4 GRB7 | |
| GH17J039852 | Enhancer | 1 | Ensembl ENCODE dbSUPER | 0.4 | -13.7 | -13727 | 3.8 | PRDM10 IKZF2 DPF2 PKNOX1 ZNF184 HMBOX1 EGR1 RUNX3 BCLAF1 NBN | GSDMB LRRC3C ORMDL3 GSDMA RPL39P4 IKZF3 GRB7 | |
| GH17J039847 | Enhancer | 0.6 | ENCODE dbSUPER | 0.4 | -8.9 | -8874 | 1.9 | PRDM10 SCRT2 ZSCAN29 ZNF316 PRDM6 MAFK | GSDMB ORMDL3 LRRC3C RPL39P4 IKZF3 GRB7 | |
| GH17J039856 | Enhancer | 0.6 | Ensembl dbSUPER | 0.4 | -16.9 | -16928 | 0.6 | NFATC3 BHLHE40 MZF1 | GSDMB IKZF3 RPL39P4 GRB7 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL39P4 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL39P4 Gene
Genomic Locations for RPL39P4 Gene
- chr17:39,839,172-39,839,573
- (GRCh38/hg38)
- Size:
- 402 bases
- Orientation:
- Minus strand
- chr17:37,995,428-37,995,826
- (GRCh37/hg19)
- Size:
- 399 bases
- Orientation:
- Minus strand
Genomic View for RPL39P4 Gene
Genes around RPL39P4 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q21.1 by HGNC
- 17q21.1 by Entrez Gene
RPL39P4 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL39P4 Gene
Proteins for RPL39P4 Gene
Post-translational modifications for RPL39P4 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL39P4
- Origene Custom Protein Services for RPL39P4
No data available for DME Specific Peptides for RPL39P4 Gene
Domains & Families for RPL39P4 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL39P4 Gene
Function for RPL39P4 Gene
Phenotypes From GWAS Catalog for RPL39P4 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL39P4 - Select products 50% OFF >
- * RPL39P4 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL39P4
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P4 Gene
Localization for RPL39P4 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL39P4 Gene
Transcripts for RPL39P4 Gene
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL39P4 - Select products 50% OFF >
- * RPL39P4 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL39P4
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for RPL39P4 Gene
- GeneLoc Exon Structure for
- RPL39P4
No data available for mRNA/cDNA for RPL39P4 Gene
Expression for RPL39P4 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL39P4 Gene
Orthologs for RPL39P4 Gene
No data available for Orthologs and Evolution for RPL39P4 Gene
Paralogs for RPL39P4 Gene
No data available for Paralogs for RPL39P4 Gene
Variants for RPL39P4 Gene
Additional Variant Information for RPL39P4 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL39P4
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P4 Gene
Disorders for RPL39P4 Gene
No disorders were found for RPL39P4 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P4 Gene
Publications for RPL39P4 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
No data available for Mastermind for RPL39P4 Gene
Products for RPL39P4 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL39P4
- Origene Custom Protein Services for RPL39P4
- Browse OriGene Inhibitory RNA Products For RPL39P4
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL39P4
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL39P4
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL39P4
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL39P4
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL39P4
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL39P4
Sources for RPL39P4 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB