Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL39P39 Gene

Aliases for RPL39P39 Gene

  • Ribosomal Protein L39 Pseudogene 39 2 3 5
  • RPL39_19_1716 3

External Ids for RPL39P39 Gene

Previous GeneCards Identifiers for RPL39P39 Gene

  • GC20U900437
  • GC20P055904

Summaries for RPL39P39 Gene

GeneCards Summary for RPL39P39 Gene

RPL39P39 (Ribosomal Protein L39 Pseudogene 39) is a Pseudogene.

Additional gene information for RPL39P39 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL39P39 Gene

Genomics for RPL39P39 Gene

GeneHancer (GH) Regulatory Elements for RPL39P39 Gene

Promoters and enhancers for RPL39P39 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I057329 Promoter 1 EPDnew 550.8 +1.3 1288 0.1 MEIS2 KLF1 ATF1 E2F1 CTBP1 E2F8 EGR1 VEZF1 ATF7 ZNF639 SPO11 RPL39P39 LOC105372687
GH20I057330 Enhancer 0.7 ENCODE 550.8 +1.5 1520 0.2 CTCF KLF1 ATF1 E2F1 CTBP1 E2F8 EGR1 VEZF1 ZNF143 ATF7 SPO11 RPL39P39 BMP7 LOC105372687
GH20I057305 Enhancer 1 FANTOM5 ENCODE 12 -22.7 -22656 0.2 SIX4 PKNOX1 ESRRA NFIB ZNF449 SIN3A BMI1 ZBTB7B MTA3 CTBP1 RPL39P39 SPO11 BMP7 GC20P057313 PIR49257 GC20M057284 LOC105372687
GH20I057503 Enhancer 0.8 Ensembl ENCODE 9.9 +175.0 174966 0.9 JUNB BATF IRF4 GABPA BCL11A POLR2A IKZF1 ETV6 KDM1A IKZF2 MTND1P9 MTRNR2L3 LOC100291105 RBM38 RAE1 CTCFL PCK1 ZBP1 RPL39P39 SPO11
GH20I057108 Enhancer 0.7 ENCODE 10.5 -219.1 -219130 1.4 RNF2 HLF ZBTB11 CEBPB CEBPG REST DMAP1 GABPA MBD1 CEBPA RPL39P39 SPO11 ENSG00000231078 ENSG00000203266
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL39P39 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL39P39 Gene

Genomic Locations for RPL39P39 Gene
387 bases
Plus strand

Genomic View for RPL39P39 Gene

Genes around RPL39P39 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P39 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P39 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P39 Gene

Proteins for RPL39P39 Gene

Post-translational modifications for RPL39P39 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P39 Gene

Domains & Families for RPL39P39 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL39P39 Gene

Function for RPL39P39 Gene

Phenotypes From GWAS Catalog for RPL39P39 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P39 Gene

Localization for RPL39P39 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL39P39 Gene

Pathways & Interactions for RPL39P39 Gene

SuperPathways for RPL39P39 Gene

No Data Available

Interacting Proteins for RPL39P39 Gene

Gene Ontology (GO) - Biological Process for RPL39P39 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL39P39 Gene

Drugs & Compounds for RPL39P39 Gene

No Compound Related Data Available

Transcripts for RPL39P39 Gene

mRNA/cDNA for RPL39P39 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P39 Gene

No ASD Table

Relevant External Links for RPL39P39 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL39P39 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL39P39 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL39P39 Gene:

genes like me logo Genes that share expression patterns with RPL39P39: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL39P39 Gene

Orthologs for RPL39P39 Gene

Evolution for RPL39P39 Gene

Gene Tree for RPL39P39 (if available)
Gene Tree for RPL39P39 (if available)

No data available for Orthologs for RPL39P39 Gene

Paralogs for RPL39P39 Gene

No data available for Paralogs for RPL39P39 Gene

Variants for RPL39P39 Gene

Additional Variant Information for RPL39P39 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P39 Gene

Disorders for RPL39P39 Gene

No disorders were found for RPL39P39 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P39 Gene

Publications for RPL39P39 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL39P39 Gene

Sources for RPL39P39 Gene

Loading form....