Aliases for RPL39P25 Gene

Aliases for RPL39P25 Gene

  • Ribosomal Protein L39 Pseudogene 25 2 3 5
  • RPL39_11_1067 3
  • RPL39P25 5

External Ids for RPL39P25 Gene

Previous GeneCards Identifiers for RPL39P25 Gene

  • GC10U901110
  • GC10M077030

Summaries for RPL39P25 Gene

GeneCards Summary for RPL39P25 Gene

RPL39P25 (Ribosomal Protein L39 Pseudogene 25) is a Pseudogene.

Additional gene information for RPL39P25 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL39P25 Gene

Genomics for RPL39P25 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL39P25 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J075243 Enhancer 1.1 Ensembl ENCODE dbSUPER 13.5 +23.8 23760 4.7 HNRNPL CREB1 ZBTB33 IKZF1 FOXA1 ZIC2 ZNF24 SOX6 MTA3 CTBP1 ZNF503-AS1 RPL39P25 HMGA1P5 DUSP13 DUSP29 COMTD1 piR-57460-062 ZNF503
GH10J075238 Enhancer 0.9 FANTOM5 Ensembl 13.4 +31.2 31231 0.4 NR2C1 ZNF792 MGA ZKSCAN8 ZNF316 USF1 MAX TFDP1 ZNF592 GABPB1 ZNF503-AS1 RPL39P25 HMGA1P5 DUSP29 COMTD1 VDAC2 lnc-COMTD1-6 ZNF503
GH10J075240 Enhancer 0.6 ENCODE dbSUPER 13.4 +29.0 28971 1.2 SPI1 FOSL2 ZNF18 ZNF624 ZNF503-AS1 RPL39P25 HMGA1P5 DUSP29 COMTD1 lnc-COMTD1-6 ZNF503
GH10J075239 Enhancer 0.5 Ensembl 13.4 +30.9 30893 0.2 NR2C1 ZNF792 ZKSCAN8 ZNF592 ZBTB33 NRF1 RPL39P25 HMGA1P5 DUSP29 ZNF503-AS1 COMTD1 lnc-COMTD1-6 ZNF503
GH10J075276 Promoter/Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -6.6 -6628 1.2 ZFX SCRT2 NRF1 MGA NFIC CEBPB KLF1 GABPB1 L3MBTL2 ZNF148 HMGA1P5 lnc-COMTD1-3 ZNF503-AS1 RPL39P25 COMTD1 ZNF503
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL39P25 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL39P25 Gene

Genomic Locations for RPL39P25 Gene
395 bases
Minus strand
154 bases
Minus strand

Genomic View for RPL39P25 Gene

Genes around RPL39P25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P25 Gene

Proteins for RPL39P25 Gene

Post-translational modifications for RPL39P25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P25 Gene

Domains & Families for RPL39P25 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL39P25 Gene

Function for RPL39P25 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P25 Gene

Localization for RPL39P25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL39P25 Gene

Pathways & Interactions for RPL39P25 Gene

PathCards logo

SuperPathways for RPL39P25 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL39P25 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL39P25 Gene

Drugs & Compounds for RPL39P25 Gene

No Compound Related Data Available

Transcripts for RPL39P25 Gene

mRNA/cDNA for RPL39P25 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P25 Gene

No ASD Table

Relevant External Links for RPL39P25 Gene

GeneLoc Exon Structure for

Expression for RPL39P25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL39P25 Gene

genes like me logo Genes that share expression patterns with RPL39P25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL39P25 Gene

Orthologs for RPL39P25 Gene

Evolution for RPL39P25 Gene

Gene Tree for RPL39P25 (if available)
Gene Tree for RPL39P25 (if available)

No data available for Orthologs for RPL39P25 Gene

Paralogs for RPL39P25 Gene

No data available for Paralogs for RPL39P25 Gene

Variants for RPL39P25 Gene

Additional Variant Information for RPL39P25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P25 Gene

Disorders for RPL39P25 Gene

No disorders were found for RPL39P25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P25 Gene

Publications for RPL39P25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL39P25 Gene

Products for RPL39P25 Gene

Sources for RPL39P25 Gene