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RPL39P22 Gene(Pseudogene)

Ribosomal Protein L39 Pseudogene 22

GCID:
GC05P036605
GIFtS:
9
Genes Participants
UDN Logo

Aliases for RPL39P22 Gene

Aliases for RPL39P22 Gene

  • Ribosomal Protein L39 Pseudogene 22 2 3
  • RPL39_8_554 3
  • AC010631.1 5

External Ids for RPL39P22 Gene

Previous GeneCards Identifiers for RPL39P22 Gene

  • GC05U901073
  • GC05P036589
  • GC05P036590
  • GC05P036591
  • GC05P036592
  • GC05P036593
  • GC05P036594
  • GC05P036595
  • GC05P036596
  • GC05P036597
  • GC05P036598
  • GC05P036599
  • GC05P036600
  • GC05P036601
  • GC05P036602
  • GC05P036603
  • GC05P036604

Summaries for RPL39P22 Gene

GeneCards Summary for RPL39P22 Gene

RPL39P22 (Ribosomal Protein L39 Pseudogene 22) is a Pseudogene.

Additional gene information for RPL39P22 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL39P22 Gene

Genomics for RPL39P22 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPL39P22 Gene

Promoters and enhancers for RPL39P22 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH05I036583 Enhancer 0.4 dbSUPER 0.8 -3.6 -3558 2.7 ZFHX2 ZNF214 EGR2 SLC1A3 C5orf42 NADK2-AS1 ENSG00000250155 RPL39P22 RNA5SP181
GH05I036573 Enhancer 0.8 Ensembl ENCODE 0.4 -13.8 -13770 3.3 SCRT1 ZNF335 MAFF JUND JUN SCRT2 USF2 FOS SLC1A3 RPL39P22 RNA5SP181
GH05I036590 Enhancer 0.3 dbSUPER 0.8 +2.6 2648 1.6 ZIC2 SLC1A3 RPL39P22
GH05I036602 Enhancer 0.6 dbSUPER 0.4 +14.5 14537 1 ZNF121 CTCF SMARCC1 ZBTB48 SCRT2 ZNF143 MAX ZIC2 RANBP3L SLC1A3 RPL39P22
GH05I036600 Enhancer 0.5 dbSUPER 0.4 +12.7 12687 2.2 OSR2 MITF SCRT1 PRDM6 SCRT2 MZF1 ZBTB8A RANBP3L SLC1A3 RPL39P22
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL39P22 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL39P22 Gene

Genomic Locations for RPL39P22 Gene
chr5:36,588,506-36,588,661
(GRCh38/hg38)
Size:
156 bases
Orientation:
Plus strand
chr5:36,588,608-36,588,763
(GRCh37/hg19)

Genomic View for RPL39P22 Gene

Genes around RPL39P22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P22 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL39P22 Gene

Proteins for RPL39P22 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL39P22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P22 Gene

Domains & Families for RPL39P22 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL39P22 Gene

Function for RPL39P22 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P22 Gene

Localization for RPL39P22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL39P22 Gene

Pathways & Interactions for RPL39P22 Gene

SuperPathways for RPL39P22 Gene

PathCards logo More details on SuperPathways for RPL39P22
No Data Available

Interacting Proteins for RPL39P22 Gene

Gene Ontology (GO) - Biological Process for RPL39P22 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL39P22 Gene

Drugs & Compounds for RPL39P22 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL39P22 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL39P22 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P22 Gene

No ASD Table

Relevant External Links for RPL39P22 Gene

GeneLoc Exon Structure for
RPL39P22
ECgene alternative splicing isoforms for
RPL39P22

Expression for RPL39P22 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL39P22 Gene

mRNA expression in normal human tissues for RPL39P22 Gene
mRNA expression by GTEx for RPL39P22 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL39P22 Gene:

RPL39P22
genes like me logo Genes that share expression patterns with RPL39P22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL39P22 Gene

Orthologs for RPL39P22 Gene

Evolution for RPL39P22 Gene

ENSEMBL:
Gene Tree for RPL39P22 (if available)
TreeFam:
Gene Tree for RPL39P22 (if available)

No data available for Orthologs for RPL39P22 Gene

Paralogs for RPL39P22 Gene

No data available for Paralogs for RPL39P22 Gene

Variants for RPL39P22 Gene

Additional Variant Information for RPL39P22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL39P22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P22 Gene

Disorders for RPL39P22 Gene

No disorders were found for RPL39P22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P22 Gene

Publications for RPL39P22 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL39P22 Gene

Sources for RPL39P22 Gene

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