Aliases for RPL39P19 Gene

Aliases for RPL39P19 Gene

  • Ribosomal Protein L39 Pseudogene 19 2 3
  • RPL39_8_448 3

External Ids for RPL39P19 Gene

Previous GeneCards Identifiers for RPL39P19 Gene

  • GC03U901255
  • GC03M186838

Summaries for RPL39P19 Gene

GeneCards Summary for RPL39P19 Gene

RPL39P19 (Ribosomal Protein L39 Pseudogene 19) is a Pseudogene.

Additional gene information for RPL39P19 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL39P19 Gene

Genomics for RPL39P19 Gene

GeneHancer (GH) Regulatory Elements for RPL39P19 Gene

Promoters and enhancers for RPL39P19 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J187120 Enhancer 0.3 Ensembl 500.7 +0.7 748 0.4 SPI1 RUNX3 RPL39P19 ADIPOQ piR-52787
GH03J187138 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -18.0 -18032 2 ZBTB40 ZNF217 CTCF NRF1 MYC GTF2E2 PHF8 ZFX ZIC2 POLR2A HSALNG0031407 RPL39L ADIPOQ RPL39P19
GH03J187129 Enhancer 1 FANTOM5 ENCODE 0.4 -9.2 -9231 2.4 FOXA2 ZNF384 USF2 USF1 FOS SRF FOSL1 IRF2 JUND ELF1 SNORA81 SNORA63B SNORA63 SNORA4 TBCCD1 RPL39L EIF4A2 ADIPOQ RFC4 RTP4
GH03J187124 Enhancer 0.6 Ensembl 0.7 -4.4 -4351 0.6 TCF12 NR2F2 IKZF1 STAT1 NR2F6 MTA3 PAX5 SPI1 NFIC MEF2A RPL39L RPL39P19 HSALNG0031407
GH03J187101 Enhancer 1.1 FANTOM5 ENCODE 0.4 +19.4 19367 1.7 ZNF217 TRIM28 MYC CTBP1 ZNF341 NFIC ZBTB17 IRF1 MAX RCOR1 ADIPOQ RPL39P19 piR-52787
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL39P19 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL39P19 Gene

Genomic Locations for RPL39P19 Gene
chr3:187,120,954-187,121,349
(GRCh38/hg38)
Size:
396 bases
Orientation:
Minus strand
chr3:186,838,742-186,839,137
(GRCh37/hg19)
Size:
396 bases
Orientation:
Minus strand

Genomic View for RPL39P19 Gene

Genes around RPL39P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P19 Gene

Proteins for RPL39P19 Gene

Post-translational modifications for RPL39P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P19 Gene

Domains & Families for RPL39P19 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL39P19 Gene

Function for RPL39P19 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P19 Gene

Localization for RPL39P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL39P19 Gene

Pathways & Interactions for RPL39P19 Gene

PathCards logo

SuperPathways for RPL39P19 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL39P19 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL39P19 Gene

Drugs & Compounds for RPL39P19 Gene

No Compound Related Data Available

Transcripts for RPL39P19 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P19 Gene

No ASD Table

Relevant External Links for RPL39P19 Gene

GeneLoc Exon Structure for
RPL39P19

No data available for mRNA/cDNA for RPL39P19 Gene

Expression for RPL39P19 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL39P19 Gene

Orthologs for RPL39P19 Gene

No data available for Orthologs and Evolution for RPL39P19 Gene

Paralogs for RPL39P19 Gene

No data available for Paralogs for RPL39P19 Gene

Variants for RPL39P19 Gene

Additional Variant Information for RPL39P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL39P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P19 Gene

Disorders for RPL39P19 Gene

No disorders were found for RPL39P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P19 Gene

Publications for RPL39P19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

No data available for Mastermind for RPL39P19 Gene

Products for RPL39P19 Gene

Sources for RPL39P19 Gene