Aliases for RPL39P14 Gene

Aliases for RPL39P14 Gene

  • Ribosomal Protein L39 Pseudogene 14 2 3 5
  • RPL39_6_311 3
  • RPL39P14 5

External Ids for RPL39P14 Gene

Previous GeneCards Identifiers for RPL39P14 Gene

  • GC02P202805
  • GC02P203097

Summaries for RPL39P14 Gene

GeneCards Summary for RPL39P14 Gene

RPL39P14 (Ribosomal Protein L39 Pseudogene 14) is a Pseudogene.

Additional gene information for RPL39P14 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL39P14 Gene

Genomics for RPL39P14 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL39P14 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J202231 Enhancer 0.2 Ensembl 600.7 -1.0 -1047 0.4 RPL39P14 NOP58 SNORD70 SNORD70B KIAA2012-AS1 HSALNG0021598 SUMO1 DAZAP2P1 KIAA2012
GH02J202230 Enhancer 0.2 Ensembl 600.7 -1.5 -1547 0.2 RPL39P14 NOP58 SNORD70 SNORD70B KIAA2012-AS1 BMPR2 HSALNG0021598 SUMO1 DAZAP2P1 KIAA2012
GH02J202236 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +6.4 6367 3.2 HNRNPL CREB1 GATAD2A ZNF629 TFE3 IKZF1 NFKBIZ KDM1A ZNF692 POLR2A HSALNG0021598 LOC100287425 SUMO1 NOP58 FAM117B NBEAL1 ENSG00000228513 RPL12P16 SCYL2P1 CDK15
GH02J202221 Enhancer 0.8 Ensembl 0.4 -9.5 -9547 2.6 RFX1 LEF1 JUND PKNOX1 ZNF24 DPF2 SOX6 TCF12 EP300 CBX3 NOP58 SNORD70 SNORD70B KIAA2012-AS1 ENSG00000273456 FAM117B ENSG00000287041 PIMREGP1 RPL39P14 SUMO1
GH02J202225 Enhancer 0.4 FANTOM5 Ensembl 0.4 -5.5 -5475 1.3 NOP58 SNORD70 SNORD70B KIAA2012-AS1 FAM117B RPL39P14 HSALNG0021598 SUMO1 DAZAP2P1 KIAA2012
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL39P14 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL39P14 Gene

Genomic Locations for RPL39P14 Gene
chr2:202,231,648-202,232,044
(GRCh38/hg38)
Size:
397 bases
Orientation:
Plus strand
chr2:203,096,371-203,096,763
(GRCh37/hg19)
Size:
393 bases
Orientation:
Plus strand

Genomic View for RPL39P14 Gene

Genes around RPL39P14 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P14 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P14 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P14 Gene

Proteins for RPL39P14 Gene

Post-translational modifications for RPL39P14 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P14 Gene

Domains & Families for RPL39P14 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL39P14 Gene

Function for RPL39P14 Gene

Phenotypes From GWAS Catalog for RPL39P14 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P14 Gene

Localization for RPL39P14 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL39P14 Gene

Pathways & Interactions for RPL39P14 Gene

PathCards logo

SuperPathways for RPL39P14 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL39P14 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL39P14 Gene

Drugs & Compounds for RPL39P14 Gene

No Compound Related Data Available

Transcripts for RPL39P14 Gene

mRNA/cDNA for RPL39P14 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P14 Gene

No ASD Table

Relevant External Links for RPL39P14 Gene

GeneLoc Exon Structure for
RPL39P14

Expression for RPL39P14 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL39P14 Gene

genes like me logo Genes that share expression patterns with RPL39P14: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL39P14 Gene

Orthologs for RPL39P14 Gene

Evolution for RPL39P14 Gene

ENSEMBL:
Gene Tree for RPL39P14 (if available)
TreeFam:
Gene Tree for RPL39P14 (if available)

No data available for Orthologs for RPL39P14 Gene

Paralogs for RPL39P14 Gene

No data available for Paralogs for RPL39P14 Gene

Variants for RPL39P14 Gene

Additional Variant Information for RPL39P14 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL39P14

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P14 Gene

Disorders for RPL39P14 Gene

No disorders were found for RPL39P14 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P14 Gene

Publications for RPL39P14 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPL39P14 Gene

Sources for RPL39P14 Gene