Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL36P4 Gene

Aliases for RPL36P4 Gene

  • Ribosomal Protein L36 Pseudogene 4 2 3 5
  • RPL36_7_1697 3
  • DJ477O4.3 3

External Ids for RPL36P4 Gene

Previous GeneCards Identifiers for RPL36P4 Gene

  • GC20U990135
  • GC20M033595
  • GC20M034133
  • GC20M030909

Summaries for RPL36P4 Gene

GeneCards Summary for RPL36P4 Gene

RPL36P4 (Ribosomal Protein L36 Pseudogene 4) is a Pseudogene.

Additional gene information for RPL36P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36P4 Gene

Genomics for RPL36P4 Gene

GeneHancer (GH) Regulatory Elements for RPL36P4 Gene

Promoters and enhancers for RPL36P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J035539 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 53.1 +3.4 3405 3.6 HDGF ZNF652 SP1 ZFX ELF3 MNT NKRF POLR2A ZNF121 CEBPG ERGIC3 PIR52983 RPL36P4 C20orf173
GH20J034954 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 30.5 +589.0 588960 2.9 ZNF473 MTA3 ZNF652 ZFX ELF3 MNT ZNF148 NKRF POLR2A MLLT1 MYH7B GSS RBM12 CPNE1 NCOA6 ERGIC3 RPL36P4 TRPC4AP ENSG00000272945 PROCR
GH20J035738 Promoter/Enhancer 3.1 UCNEbase EPDnew FANTOM5 Ensembl ENCODE dbSUPER 22.1 -196.9 -196917 7 HDGF ZNF652 ELF3 SP1 CC2D1A ZFX ZKSCAN8 MNT ZNF148 NKRF RBM39 CPNE1 RBM12 AAR2 ERGIC3 NCOA6 TRPC4AP RPL36P4 PHF20 MYL9
GH20J035601 Promoter/Enhancer 1.4 Ensembl ENCODE 35.7 -56.8 -56795 1.6 ZFX ELF3 GTF2F1 TFE3 TRIM24 CREM RAD21 GMEB1 RNF2 PHF21A RPL36P4 RBM12 NCOA6 CEP250 RBM39 CPNE1 FER1L4 RPL37P1
GH20J036459 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 21.1 -921.8 -921778 14 ZFX SP1 ELF3 MNT CBFA2T2 ZNF148 POLR2A CEBPG GTF2F1 ZNF687 DLGAP4 RBM12 RBL1 RBM39 AAR2 RPL36P4 MYL9 ERGIC3 TGIF2 CPNE1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL36P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36P4 Gene

Genomic Locations for RPL36P4 Gene
chr20:35,544,377-35,544,806
(GRCh38/hg38)
Size:
430 bases
Orientation:
Minus strand
chr20:34,132,122-34,132,551
(GRCh37/hg19)
Size:
430 bases
Orientation:
Minus strand

Genomic View for RPL36P4 Gene

Genes around RPL36P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36P4 Gene

Proteins for RPL36P4 Gene

Post-translational modifications for RPL36P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36P4 Gene

Domains & Families for RPL36P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36P4 Gene

Function for RPL36P4 Gene

Phenotypes From GWAS Catalog for RPL36P4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36P4 Gene

Localization for RPL36P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36P4 Gene

Pathways & Interactions for RPL36P4 Gene

PathCards logo

SuperPathways for RPL36P4 Gene

No Data Available

Interacting Proteins for RPL36P4 Gene

Gene Ontology (GO) - Biological Process for RPL36P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36P4 Gene

Drugs & Compounds for RPL36P4 Gene

No Compound Related Data Available

Transcripts for RPL36P4 Gene

mRNA/cDNA for RPL36P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36P4 Gene

No ASD Table

Relevant External Links for RPL36P4 Gene

GeneLoc Exon Structure for
RPL36P4
ECgene alternative splicing isoforms for
RPL36P4

Expression for RPL36P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36P4 Gene:

RPL36P4
genes like me logo Genes that share expression patterns with RPL36P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36P4 Gene

Orthologs for RPL36P4 Gene

Evolution for RPL36P4 Gene

ENSEMBL:
Gene Tree for RPL36P4 (if available)
TreeFam:
Gene Tree for RPL36P4 (if available)

No data available for Orthologs for RPL36P4 Gene

Paralogs for RPL36P4 Gene

No data available for Paralogs for RPL36P4 Gene

Variants for RPL36P4 Gene

Additional Variant Information for RPL36P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36P4 Gene

Disorders for RPL36P4 Gene

No disorders were found for RPL36P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36P4 Gene

Publications for RPL36P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL36P4 Gene

Sources for RPL36P4 Gene

Content
Loading form....