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Aliases for RPL36P17 Gene

Subcategory (RNA class) for RPL36P17 Gene

antisense

Aliases for RPL36P17 Gene

  • Ribosomal Protein L36 Pseudogene 17 2 3
  • RPL36_8_1743 3
  • AC003071.2 5

External Ids for RPL36P17 Gene

ORGUL Members for RPL36P17 Gene

Previous GeneCards Identifiers for RPL36P17 Gene

  • GC22U900523
  • GC22M030502

Summaries for RPL36P17 Gene

GeneCards Summary for RPL36P17 Gene

RPL36P17 (Ribosomal Protein L36 Pseudogene 17) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPL36P17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36P17 Gene

Genomics for RPL36P17 Gene

GeneHancer (GH) Regulatory Elements for RPL36P17 Gene

Promoters and enhancers for RPL36P17 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I030108 Enhancer 1 Ensembl ENCODE 0.8 -3.3 -3275 0.7 YBX1 ZNF2 RAD21 ZNF121 ARID2 ZNF366 ZNF143 ZNF654 ZNF362 NCOA1 ASCC2 HORMAD2-AS1 EWSR1 TUG1 RPL36P17 RPS3AP51 HORMAD2
GH22I030088 Enhancer 0.9 Ensembl ENCODE 0.4 +16.2 16207 0.8 CTCF RB1 ZNF449 ZNF76 ZNF384 EBF1 CEBPG RAD21 RFX5 ZNF335 ASCC2 LIF HORMAD2 HORMAD2-AS1 RPL36P17
GH22I030115 Enhancer 0.6 ENCODE 0.4 -11.2 -11177 1.7 SCRT1 SOX5 SOX13 FOXA2 CEBPG ZNF623 RAD21 ZNF335 JUND PRDM6 MTMR3 ASCC2 HORMAD2-AS1 RPL36P17 RPS3AP51 HORMAD2
GH22I030111 Enhancer 0.2 FANTOM5 0.4 -6.2 -6152 0 LIF RPL36P17 RPS3AP51 HORMAD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL36P17 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36P17 Gene

Genomic Locations for RPL36P17 Gene
chr22:30,105,094-30,105,408
(GRCh38/hg38)
Size:
315 bases
Orientation:
Minus strand
chr22:30,501,083-30,501,397
(GRCh37/hg19)

Genomic View for RPL36P17 Gene

Genes around RPL36P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36P17 Gene

Proteins for RPL36P17 Gene

Post-translational modifications for RPL36P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36P17 Gene

Domains & Families for RPL36P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36P17 Gene

Function for RPL36P17 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36P17 Gene

Localization for RPL36P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36P17 Gene

Pathways & Interactions for RPL36P17 Gene

SuperPathways for RPL36P17 Gene

No Data Available

Interacting Proteins for RPL36P17 Gene

Gene Ontology (GO) - Biological Process for RPL36P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36P17 Gene

Drugs & Compounds for RPL36P17 Gene

No Compound Related Data Available

Transcripts for RPL36P17 Gene

mRNA/cDNA for RPL36P17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36P17 Gene

No ASD Table

Relevant External Links for RPL36P17 Gene

GeneLoc Exon Structure for
RPL36P17
ECgene alternative splicing isoforms for
RPL36P17

Expression for RPL36P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36P17 Gene

mRNA differential expression in normal tissues according to GTEx for RPL36P17 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL36P17 Gene:

RPL36P17
genes like me logo Genes that share expression patterns with RPL36P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36P17 Gene

Orthologs for RPL36P17 Gene

Evolution for RPL36P17 Gene

ENSEMBL:
Gene Tree for RPL36P17 (if available)
TreeFam:
Gene Tree for RPL36P17 (if available)

No data available for Orthologs for RPL36P17 Gene

Paralogs for RPL36P17 Gene

No data available for Paralogs for RPL36P17 Gene

Variants for RPL36P17 Gene

Additional Variant Information for RPL36P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36P17 Gene

Disorders for RPL36P17 Gene

No disorders were found for RPL36P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36P17 Gene

Publications for RPL36P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL36P17 Gene

Sources for RPL36P17 Gene

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