Aliases for RPL36AP6 Gene

Aliases for RPL36AP6 Gene

  • Ribosomal Protein L36a Pseudogene 6 2 3 5
  • RPL36A_12_1002 3
  • BA380I20.1 3

External Ids for RPL36AP6 Gene

Previous GeneCards Identifiers for RPL36AP6 Gene

  • GC09U900699
  • GC09M109637
  • GC09M110596
  • GC09M080195

Summaries for RPL36AP6 Gene

GeneCards Summary for RPL36AP6 Gene

RPL36AP6 (Ribosomal Protein L36a Pseudogene 6) is a Pseudogene.

Additional gene information for RPL36AP6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL36AP6 Gene

Genomics for RPL36AP6 Gene

GeneHancer (GH) Regulatory Elements for RPL36AP6 Gene

Promoters and enhancers for RPL36AP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J107826 Enhancer 0.8 FANTOM5 ENCODE 0.4 +7.4 7363 1.2 ZBTB5 ARNT IRF1 BHLHE40 KDM1A L3MBTL2 GATA1 ATF3 ZNF24 BCL6B RNU6-1064P KLF4 RPL36AP6 piR-47162-184 RF00017-7792
GH09J107819 Enhancer 0.7 ENCODE 0.4 +14.9 14900 0.9 ZNF217 EP300 ZSCAN5C ZNF639 ZIC2 TRIM28 HES1 GATAD2B CTBP1 OSR2 piR-47162-184 piR-47628-199 piR-58297-506 RNU6-996P RPL36AP6 RF00017-7792
GH09J107841 Enhancer 0.4 FANTOM5 Ensembl 0.4 -6.2 -6245 2.2 KLF4 RPL36AP6 ENSG00000233727 RF00017-7792
GH09J107820 Enhancer 0.4 FANTOM5 0.4 +14.1 14066 0.2 POLR2A ZNF512B piR-47162-184 RNU6-996P RPL36AP6 RF00017-7792
GH09J107828 Enhancer 0.3 Ensembl 0.4 +6.0 5955 0.6 ZNF184 RPL36AP6 piR-47162-184 RF00017-7792
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL36AP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36AP6 Gene

Genomic Locations for RPL36AP6 Gene
chr9:107,834,457-107,834,856
(GRCh38/hg38)
Size:
400 bases
Orientation:
Minus strand
chr9:110,596,738-110,597,137
(GRCh37/hg19)
Size:
400 bases
Orientation:
Minus strand

Genomic View for RPL36AP6 Gene

Genes around RPL36AP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP6 Gene

Proteins for RPL36AP6 Gene

Post-translational modifications for RPL36AP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP6 Gene

Domains & Families for RPL36AP6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL36AP6 Gene

Function for RPL36AP6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP6 Gene

Localization for RPL36AP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP6 Gene

Pathways & Interactions for RPL36AP6 Gene

PathCards logo

SuperPathways for RPL36AP6 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL36AP6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL36AP6 Gene

Drugs & Compounds for RPL36AP6 Gene

No Compound Related Data Available

Transcripts for RPL36AP6 Gene

mRNA/cDNA for RPL36AP6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP6 Gene

No ASD Table

Relevant External Links for RPL36AP6 Gene

GeneLoc Exon Structure for
RPL36AP6

Expression for RPL36AP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36AP6 Gene

genes like me logo Genes that share expression patterns with RPL36AP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP6 Gene

Orthologs for RPL36AP6 Gene

Evolution for RPL36AP6 Gene

ENSEMBL:
Gene Tree for RPL36AP6 (if available)
TreeFam:
Gene Tree for RPL36AP6 (if available)

No data available for Orthologs for RPL36AP6 Gene

Paralogs for RPL36AP6 Gene

No data available for Paralogs for RPL36AP6 Gene

Variants for RPL36AP6 Gene

Additional Variant Information for RPL36AP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP6 Gene

Disorders for RPL36AP6 Gene

Additional Disease Information for RPL36AP6

Genetic Association Database
(GAD)

No disorders were found for RPL36AP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL36AP6 Gene

Publications for RPL36AP6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPL36AP6 Gene

Sources for RPL36AP6 Gene