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Aliases for RPL36AP54 Gene

Subcategory (RNA class) for RPL36AP54 Gene


Aliases for RPL36AP54 Gene

  • Ribosomal Protein L36a Pseudogene 54 2 3
  • RPL36A_28_1814 3
  • AC004383.1 5

External Ids for RPL36AP54 Gene

ORGUL Members for RPL36AP54 Gene

Previous GeneCards Identifiers for RPL36AP54 Gene

  • GC0XU901249
  • GC0XP133657

Summaries for RPL36AP54 Gene

GeneCards Summary for RPL36AP54 Gene

RPL36AP54 (Ribosomal Protein L36a Pseudogene 54) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL36AP54 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP54 Gene

Genomics for RPL36AP54 Gene

GeneHancer (GH) Regulatory Elements for RPL36AP54 Gene

Promoters and enhancers for RPL36AP54 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI134795 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.1 +274.1 274098 2.2 ATF1 ARID4B SIN3A DMAP1 GLI4 POLR2B GLIS2 ZNF213 E2F8 SP3 FAM122B FAM122C ZNF75D RPL36AP54 INTS6L
GH0XI134870 Enhancer 0.4 ENCODE 10.1 +347.9 347936 0.8 ZNF585B TCF7L2 FAM122B RTL8A PHF6 RPL36AP54 GC0XP134864 MOSPD1
GH0XI134511 Enhancer 0.5 ENCODE 0.4 -10.0 -10022 2.4 JUND RFX1 JUN PRDM10 FOSL2 FOS ZNF600 PIR45670 RPL36AP54 HPRT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL36AP54 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36AP54 Gene

Genomic Locations for RPL36AP54 Gene
301 bases
Plus strand

Genomic View for RPL36AP54 Gene

Genes around RPL36AP54 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP54 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP54 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP54 Gene

Proteins for RPL36AP54 Gene

Post-translational modifications for RPL36AP54 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP54 Gene

Domains & Families for RPL36AP54 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP54 Gene

Function for RPL36AP54 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP54 Gene

Localization for RPL36AP54 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP54 Gene

Pathways & Interactions for RPL36AP54 Gene

SuperPathways for RPL36AP54 Gene

No Data Available

Interacting Proteins for RPL36AP54 Gene

Gene Ontology (GO) - Biological Process for RPL36AP54 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL36AP54 Gene

Drugs & Compounds for RPL36AP54 Gene

No Compound Related Data Available

Transcripts for RPL36AP54 Gene

mRNA/cDNA for RPL36AP54 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP54 Gene

No ASD Table

Relevant External Links for RPL36AP54 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL36AP54 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36AP54 Gene

mRNA differential expression in normal tissues according to GTEx for RPL36AP54 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.6) and Brain - Cerebellum (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP54 Gene:

genes like me logo Genes that share expression patterns with RPL36AP54: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP54 Gene

Orthologs for RPL36AP54 Gene

Evolution for RPL36AP54 Gene

Gene Tree for RPL36AP54 (if available)
Gene Tree for RPL36AP54 (if available)

No data available for Orthologs for RPL36AP54 Gene

Paralogs for RPL36AP54 Gene

No data available for Paralogs for RPL36AP54 Gene

Variants for RPL36AP54 Gene

Additional Variant Information for RPL36AP54 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP54 Gene

Disorders for RPL36AP54 Gene

No disorders were found for RPL36AP54 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP54 Gene

Publications for RPL36AP54 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL36AP54 Gene

Sources for RPL36AP54 Gene

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