Aliases for RPL36AP50 Gene

Aliases for RPL36AP50 Gene

  • Ribosomal Protein L36a Pseudogene 50 2 3
  • RPL36A_26_1671 3

External Ids for RPL36AP50 Gene

Previous GeneCards Identifiers for RPL36AP50 Gene

  • GC19U901042
  • GC19P055486

Summaries for RPL36AP50 Gene

GeneCards Summary for RPL36AP50 Gene

RPL36AP50 (Ribosomal Protein L36a Pseudogene 50) is a Pseudogene.

Additional gene information for RPL36AP50 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL36AP50 Gene

Genomics for RPL36AP50 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL36AP50 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J054973 Promoter 0.3 Ensembl 250.7 +0.1 116 0.2 ENSG00000243494 NONHSAG026547.2 RPL36AP50 NLRP7 HSALNG0127586-001 NLRP2 GP6
GH19J054967 Promoter 0.3 EPDnew 0.4 -5.9 -5904 0.1 HSALNG0127584 NLRP7 NLRP2 RPL36AP50 GP6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL36AP50 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL36AP50 Gene

Latest Assembly
chr19:54,973,785-54,974,074
(GRCh38/hg38)
Size:
290 bases
Orientation:
Plus strand

Previous Assembly
chr19:55,485,153-55,485,442
(GRCh37/hg19 by Entrez Gene)
Size:
290 bases
Orientation:
Plus strand

Alternative Locations (GRCh38/hg38)

  • chr19(ALT_REF_LOCI_1):877,183-877,472 (+)
  • chr19(ALT_REF_LOCI_2):618,987-619,276 (+)
  • chr19(ALT_REF_LOCI_3):953,771-954,060 (+)
  • chr19(ALT_REF_LOCI_4):981,308-981,597 (+)
  • chr19(ALT_REF_LOCI_5):955,857-956,146 (+)
  • chr19(ALT_REF_LOCI_6):892,150-892,439 (+)
  • chr19(ALT_REF_LOCI_7):876,540-876,829 (+)
  • chr19(ALT_REF_LOCI_8):685,946-686,235 (+)
  • chr19(ALT_REF_LOCI_9):956,267-956,556 (+)

Genomic View for RPL36AP50 Gene

Genes around RPL36AP50 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP50 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP50 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP50 Gene

Proteins for RPL36AP50 Gene

Post-translational modifications for RPL36AP50 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP50 Gene

Domains & Families for RPL36AP50 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL36AP50 Gene

Function for RPL36AP50 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP50 Gene

Localization for RPL36AP50 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP50 Gene

Pathways & Interactions for RPL36AP50 Gene

PathCards logo

SuperPathways for RPL36AP50 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL36AP50 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL36AP50 Gene

Drugs & Compounds for RPL36AP50 Gene

No Compound Related Data Available

Transcripts for RPL36AP50 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP50 Gene

No ASD Table

Relevant External Links for RPL36AP50 Gene

GeneLoc Exon Structure for
RPL36AP50

No data available for mRNA/cDNA for RPL36AP50 Gene

Expression for RPL36AP50 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP50 Gene

Orthologs for RPL36AP50 Gene

No data available for Orthologs and Evolution for RPL36AP50 Gene

Paralogs for RPL36AP50 Gene

No data available for Paralogs for RPL36AP50 Gene

Variants for RPL36AP50 Gene

Additional Variant Information for RPL36AP50 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP50
Leiden Open Variation Database (LOVD)
RPL36AP50

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP50 Gene

Disorders for RPL36AP50 Gene

No disorders were found for RPL36AP50 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP50 Gene

Publications for RPL36AP50 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL36AP50 Gene

Products for RPL36AP50 Gene

Sources for RPL36AP50 Gene