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Aliases for RPL36AP48 Gene

Aliases for RPL36AP48 Gene

  • Ribosomal Protein L36a Pseudogene 48 2 3 5
  • RPL36A_23_1571 3

External Ids for RPL36AP48 Gene

Previous GeneCards Identifiers for RPL36AP48 Gene

  • GC17P062653
  • GC17P065222

Summaries for RPL36AP48 Gene

GeneCards Summary for RPL36AP48 Gene

RPL36AP48 (Ribosomal Protein L36a Pseudogene 48) is a Pseudogene.

Additional gene information for RPL36AP48 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP48 Gene

Genomics for RPL36AP48 Gene

GeneHancer (GH) Regulatory Elements for RPL36AP48 Gene

Promoters and enhancers for RPL36AP48 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J067224 Enhancer 0.7 FANTOM5 650.7 -0.5 -526 0.2 USF1 L3MBTL2 NFYC MAX USF2 REST ATF2 CHAMP1 SREBF1 SP1 ENSG00000264421 RPL36AP48 GC17P067226 HELZ GC17P067200
GH17J067364 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 14.7 +141.1 141059 3.1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZNF610 GLIS1 NBN KDM1A PSMD12 PITPNC1 BPTF HELZ ENSG00000267731 NOL11 ENSG00000264421 RPL36AP48 FBXO36P1 GC17M067328
GH17J067824 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 14.6 +601.4 601434 3.7 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF213 ZNF143 ZNF548 ZNF263 SP3 BPTF HELZ NOL11 ENSG00000267731 SH3GL1P3 FBXO36P1 RPL36AP48 ENSG00000264421 LOC100418928 LINC00674
GH17J066301 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.6 -920.6 -920560 4.7 HDGF SMAD1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 SLC30A9 PRKCA ENSG00000270870 ENSG00000264421 RPL36AP48 HELZ RN7SL735P
GH17J066506 Enhancer 1.4 Ensembl ENCODE dbSUPER 14.6 -716.0 -715983 4.1 HDGF PKNOX1 FEZF1 ZNF2 YY1 ZNF213 ZNF416 FOS DEK ZNF592 ENSG00000264421 RPL36AP48 ENSG00000270870 HELZ APOH PRKCA GC17M066521 PRKCA-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL36AP48 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36AP48 Gene

Genomic Locations for RPL36AP48 Gene
chr17:67,224,700-67,225,086
(GRCh38/hg38)
Size:
387 bases
Orientation:
Plus strand
chr17:65,220,816-65,221,202
(GRCh37/hg19)
Size:
387 bases
Orientation:
Plus strand

Genomic View for RPL36AP48 Gene

Genes around RPL36AP48 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP48 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP48 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP48 Gene

Proteins for RPL36AP48 Gene

Post-translational modifications for RPL36AP48 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP48 Gene

Domains & Families for RPL36AP48 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP48 Gene

Function for RPL36AP48 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP48 Gene

Localization for RPL36AP48 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP48 Gene

Pathways & Interactions for RPL36AP48 Gene

SuperPathways for RPL36AP48 Gene

No Data Available

Interacting Proteins for RPL36AP48 Gene

Gene Ontology (GO) - Biological Process for RPL36AP48 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP48 Gene

Drugs & Compounds for RPL36AP48 Gene

No Compound Related Data Available

Transcripts for RPL36AP48 Gene

mRNA/cDNA for RPL36AP48 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP48 Gene

No ASD Table

Relevant External Links for RPL36AP48 Gene

GeneLoc Exon Structure for
RPL36AP48
ECgene alternative splicing isoforms for
RPL36AP48

Expression for RPL36AP48 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36AP48 Gene

mRNA differential expression in normal tissues according to GTEx for RPL36AP48 Gene

This gene is overexpressed in Testis (x51.6).

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP48 Gene:

RPL36AP48
genes like me logo Genes that share expression patterns with RPL36AP48: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP48 Gene

Orthologs for RPL36AP48 Gene

Evolution for RPL36AP48 Gene

ENSEMBL:
Gene Tree for RPL36AP48 (if available)
TreeFam:
Gene Tree for RPL36AP48 (if available)

No data available for Orthologs for RPL36AP48 Gene

Paralogs for RPL36AP48 Gene

No data available for Paralogs for RPL36AP48 Gene

Variants for RPL36AP48 Gene

Additional Variant Information for RPL36AP48 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP48

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP48 Gene

Disorders for RPL36AP48 Gene

No disorders were found for RPL36AP48 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP48 Gene

Publications for RPL36AP48 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL36AP48 Gene

Sources for RPL36AP48 Gene

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