Aliases for RPL36AP46 Gene

Aliases for RPL36AP46 Gene

  • Ribosomal Protein L36a Pseudogene 46 2 3
  • Ribosomal Protein L36a (RPL36A) Pseudogene 5
  • RPL36A_22_1565 3
  • AC110602.1 5

External Ids for RPL36AP46 Gene

Previous GeneCards Identifiers for RPL36AP46 Gene

  • GC17M056162
  • GC17M058805

Summaries for RPL36AP46 Gene

GeneCards Summary for RPL36AP46 Gene

RPL36AP46 (Ribosomal Protein L36a Pseudogene 46) is a Pseudogene.

Additional gene information for RPL36AP46 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL36AP46 Gene

Genomics for RPL36AP46 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL36AP46 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J060727 Enhancer 0.2 FANTOM5 600.7 -0.2 -173 0.2 lnc-APPBP2-3 RPL36AP46 RPS6KB1 ENSG00000252534 BCAS3 TBX2
GH17J060729 Enhancer 1 Ensembl ENCODE 0.7 -2.8 -2784 1 GATAD2A ATF7 PRDM10 TFE3 POLR2A RXRB SP1 CEBPA FOXK2 SOX13 HEATR6 RPS6KB1 RPL36AP46 ENSG00000252534 BCAS3 TBX2
GH17J060743 Promoter/Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.4 -16.6 -16604 1.4 POLR2A ZNF384 ZBTB40 RPS6KB1 ENSG00000252534 RPL36AP46 BCAS3 TBX2
GH17J060747 Enhancer 0.5 ENCODE CraniofacialAtlas 0.4 -20.0 -20014 0.6 BCLAF1 YY1 ENSG00000252534 RPS6KB1 RPL36AP46 BCAS3 TBX2
GH17J060748 Enhancer 0.4 ENCODE 0.4 -21.0 -20978 0.2 PRDM1 BCLAF1 USF1 NFXL1 ENSG00000252534 RPL36AP46 BCAS3 TBX2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL36AP46 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL36AP46 Gene

Genomic Locations for RPL36AP46 Gene
chr17:60,727,122-60,727,497
(GRCh38/hg38)
Size:
376 bases
Orientation:
Minus strand
chr17:58,804,526-58,804,843
(GRCh37/hg19)
Size:
318 bases
Orientation:
Minus strand

Genomic View for RPL36AP46 Gene

Genes around RPL36AP46 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP46 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP46 Gene

Proteins for RPL36AP46 Gene

Post-translational modifications for RPL36AP46 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP46 Gene

Domains & Families for RPL36AP46 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL36AP46 Gene

Function for RPL36AP46 Gene

Phenotypes From GWAS Catalog for RPL36AP46 Gene

Phenotypes for RPL36AP46 Gene

genes like me logo Genes that share phenotypes with RPL36AP46: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP46 Gene

Localization for RPL36AP46 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP46 Gene

Pathways & Interactions for RPL36AP46 Gene

PathCards logo

SuperPathways for RPL36AP46 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL36AP46 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL36AP46 Gene

Drugs & Compounds for RPL36AP46 Gene

No Compound Related Data Available

Transcripts for RPL36AP46 Gene

mRNA/cDNA for RPL36AP46 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP46 Gene

No ASD Table

Relevant External Links for RPL36AP46 Gene

GeneLoc Exon Structure for
RPL36AP46

Expression for RPL36AP46 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36AP46 Gene

genes like me logo Genes that share expression patterns with RPL36AP46: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP46 Gene

Orthologs for RPL36AP46 Gene

Evolution for RPL36AP46 Gene

ENSEMBL:
Gene Tree for RPL36AP46 (if available)
TreeFam:
Gene Tree for RPL36AP46 (if available)

No data available for Orthologs for RPL36AP46 Gene

Paralogs for RPL36AP46 Gene

No data available for Paralogs for RPL36AP46 Gene

Variants for RPL36AP46 Gene

Additional Variant Information for RPL36AP46 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP46

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP46 Gene

Disorders for RPL36AP46 Gene

No disorders were found for RPL36AP46 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP46 Gene

Publications for RPL36AP46 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL36AP46 Gene

Products for RPL36AP46 Gene

Sources for RPL36AP46 Gene