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Aliases for RPL36AP46 Gene
Aliases for RPL36AP46 Gene
External Ids for RPL36AP46 Gene
- HGNC: 35812
- Entrez Gene: 729621
- Ensembl: ENSG00000224011
Previous GeneCards Identifiers for RPL36AP46 Gene
- GC17M056162
- GC17M058805
Summaries for RPL36AP46 Gene
GeneCards Summary for RPL36AP46 Gene
RPL36AP46 (Ribosomal Protein L36a Pseudogene 46) is a Pseudogene.
Additional gene information for RPL36AP46 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL36AP46 Gene
Genomics for RPL36AP46 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL36AP46 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17J060727 | Enhancer | 0.2 | FANTOM5 | 600.7 | -0.2 | -173 | 0.2 | lnc-APPBP2-3 RPL36AP46 RPS6KB1 ENSG00000252534 BCAS3 TBX2 | ||
| GH17J060729 | Enhancer | 1 | Ensembl ENCODE | 0.7 | -2.8 | -2784 | 1 | GATAD2A ATF7 PRDM10 TFE3 POLR2A RXRB SP1 CEBPA FOXK2 SOX13 | HEATR6 RPS6KB1 RPL36AP46 ENSG00000252534 BCAS3 TBX2 | |
| GH17J060743 | Promoter/Enhancer | 0.9 | Ensembl ENCODE CraniofacialAtlas | 0.4 | -16.6 | -16604 | 1.4 | POLR2A ZNF384 ZBTB40 | RPS6KB1 ENSG00000252534 RPL36AP46 BCAS3 TBX2 | |
| GH17J060747 | Enhancer | 0.5 | ENCODE CraniofacialAtlas | 0.4 | -20.0 | -20014 | 0.6 | BCLAF1 YY1 | ENSG00000252534 RPS6KB1 RPL36AP46 BCAS3 TBX2 | |
| GH17J060748 | Enhancer | 0.4 | ENCODE | 0.4 | -21.0 | -20978 | 0.2 | PRDM1 BCLAF1 USF1 NFXL1 | ENSG00000252534 RPL36AP46 BCAS3 TBX2 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL36AP46 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL36AP46 Gene
Genomic Locations for RPL36AP46 Gene
- chr17:60,727,122-60,727,497
- (GRCh38/hg38)
- Size:
- 376 bases
- Orientation:
- Minus strand
- chr17:58,804,526-58,804,843
- (GRCh37/hg19)
- Size:
- 318 bases
- Orientation:
- Minus strand
Genomic View for RPL36AP46 Gene
Genes around RPL36AP46 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q23.2 by HGNC
- 17q23.2 by Entrez Gene
- 17q23.2 by Ensembl
RPL36AP46 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL36AP46 Gene
Proteins for RPL36AP46 Gene
Post-translational modifications for RPL36AP46 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL36AP46
- Origene Custom Protein Services for RPL36AP46
No data available for DME Specific Peptides for RPL36AP46 Gene
Domains & Families for RPL36AP46 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL36AP46 Gene
Function for RPL36AP46 Gene
Phenotypes From GWAS Catalog for RPL36AP46 Gene
Phenotypes for RPL36AP46 Gene
- GenomeRNAi human phenotypes for RPL36AP46:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL36AP46 - Select products 50% OFF >
- * RPL36AP46 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL36AP46
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP46 Gene
Localization for RPL36AP46 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP46 Gene
Transcripts for RPL36AP46 Gene
mRNA/cDNA for RPL36AP46 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000437414 318 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL36AP46 - Select products 50% OFF >
- * RPL36AP46 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL36AP46
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for RPL36AP46 Gene
- GeneLoc Exon Structure for
- RPL36AP46
Expression for RPL36AP46 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP46 Gene
Orthologs for RPL36AP46 Gene
No data available for Orthologs for RPL36AP46 Gene
Paralogs for RPL36AP46 Gene
No data available for Paralogs for RPL36AP46 Gene
Variants for RPL36AP46 Gene
Additional Variant Information for RPL36AP46 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL36AP46
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP46 Gene
Disorders for RPL36AP46 Gene
No disorders were found for RPL36AP46 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP46 Gene
Publications for RPL36AP46 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
No data available for Mastermind for RPL36AP46 Gene
Products for RPL36AP46 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL36AP46
- Origene Custom Protein Services for RPL36AP46
- Browse OriGene Inhibitory RNA Products For RPL36AP46
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL36AP46
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL36AP46
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL36AP46
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL36AP46
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL36AP46
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL36AP46
Sources for RPL36AP46 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB