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Aliases for RPL36AP42 Gene

Aliases for RPL36AP42 Gene

  • Ribosomal Protein L36a Pseudogene 42 2 3
  • RPL36A_18_1363 3

External Ids for RPL36AP42 Gene

Previous GeneCards Identifiers for RPL36AP42 Gene

  • GC14U900915
  • GC14M050085

Summaries for RPL36AP42 Gene

GeneCards Summary for RPL36AP42 Gene

RPL36AP42 (Ribosomal Protein L36a Pseudogene 42) is a Pseudogene.

Additional gene information for RPL36AP42 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP42 Gene

Genomics for RPL36AP42 Gene

GeneHancer (GH) Regulatory Elements for RPL36AP42 Gene

Promoters and enhancers for RPL36AP42 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I049616 Enhancer 0.6 ENCODE 550.8 +1.4 1433 2 SP5 CBFA2T3 THRB ZNF121 PRDM6 POLR2A EGR1 HDAC2 KDM1A BCLAF1 RPL36AP42 RPL36AL LRR1 RHOQP1 ENSG00000278009
GH14I049618 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.8 -3.1 -3066 6.4 HDGF PKNOX1 SMAD1 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF207 RPL36AL MGAT2 ENSG00000258377 LRR1 DNAAF2 RNU6ATAC30P VCPKMT RHOQP1 KLHDC2 NEMF
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL36AP42 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36AP42 Gene

Genomic Locations for RPL36AP42 Gene
chr14:49,618,742-49,619,119
(GRCh38/hg38)
Size:
378 bases
Orientation:
Minus strand
chr14:50,085,460-50,085,837
(GRCh37/hg19)

Genomic View for RPL36AP42 Gene

Genes around RPL36AP42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP42 Gene

Proteins for RPL36AP42 Gene

Post-translational modifications for RPL36AP42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP42 Gene

Domains & Families for RPL36AP42 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP42 Gene

Function for RPL36AP42 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP42 Gene

Localization for RPL36AP42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP42 Gene

Pathways & Interactions for RPL36AP42 Gene

SuperPathways for RPL36AP42 Gene

No Data Available

Interacting Proteins for RPL36AP42 Gene

Gene Ontology (GO) - Biological Process for RPL36AP42 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP42 Gene

Drugs & Compounds for RPL36AP42 Gene

No Compound Related Data Available

Transcripts for RPL36AP42 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP42 Gene

No ASD Table

Relevant External Links for RPL36AP42 Gene

GeneLoc Exon Structure for
RPL36AP42
ECgene alternative splicing isoforms for
RPL36AP42

No data available for mRNA/cDNA for RPL36AP42 Gene

Expression for RPL36AP42 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP42 Gene:

RPL36AP42
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP42 Gene

Orthologs for RPL36AP42 Gene

No data available for Orthologs and Evolution for RPL36AP42 Gene

Paralogs for RPL36AP42 Gene

No data available for Paralogs for RPL36AP42 Gene

Variants for RPL36AP42 Gene

Additional Variant Information for RPL36AP42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP42 Gene

Disorders for RPL36AP42 Gene

No disorders were found for RPL36AP42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP42 Gene

Publications for RPL36AP42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL36AP42 Gene

Sources for RPL36AP42 Gene

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