Aliases for RPL36AP41 Gene

Aliases for RPL36AP41 Gene

  • Ribosomal Protein L36a Pseudogene 41 2 3 5
  • RPL36A_17_1248 3
  • RPL36AP41 5

External Ids for RPL36AP41 Gene

Previous GeneCards Identifiers for RPL36AP41 Gene

  • GC12U901119
  • GC12M064266

Summaries for RPL36AP41 Gene

GeneCards Summary for RPL36AP41 Gene

RPL36AP41 (Ribosomal Protein L36a Pseudogene 41) is a Pseudogene.

Additional gene information for RPL36AP41 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL36AP41 Gene

Genomics for RPL36AP41 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL36AP41 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J063870 Enhancer 0.3 Ensembl 250.7 +0.8 843 0.8 POU5F1 ZNF121 RPL36AP41 lnc-DPY19L2-6 DPY19L2 SRGAP1 KICS2
GH12J063842 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 +26.9 26871 4.5 BCLAF1 ZNF207 ZNF654 MYC ZNF600 KLF9 CEBPA POLR2A ZIC2 ZBTB10 SRGAP1 lnc-DPY19L2-8 PABPC1P4 TBK1 ENSG00000255566 DPY19L2 RPL36AP41 lnc-DPY19L2-6 KICS2
GH12J063860 Enhancer 1 Ensembl ENCODE 0.4 +9.3 9316 4.3 JUND ZIC2 ZNF217 CEBPB FEZF1 EP300 MBD2 FOXA2 CTBP1 PRDM1 PABPC1P4 DPY19L2 lnc-DPY19L2-6 RPL36AP41 SRGAP1 KICS2
GH12J063869 Enhancer 0.3 Ensembl 0.7 +2.4 2443 1.2 CUX1 MAFK ENSG00000255629 PABPC1P4 DPY19L2 RPL36AP41 lnc-DPY19L2-6 SRGAP1 KICS2
GH12J063877 Enhancer 0.4 Ensembl 0.4 -5.2 -5157 0.4 CEBPA CEBPB CEBPG ZNF644 ENSG00000256571 lnc-DPY19L2-6 RPL36AP41 SRGAP1 KICS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL36AP41 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL36AP41 Gene

Latest Assembly
chr12:63,871,739-63,872,044
(GRCh38/hg38)
Size:
306 bases
Orientation:
Minus strand

Previous Assembly
chr12:64,265,519-64,265,824
(GRCh37/hg19 by Entrez Gene)
Size:
306 bases
Orientation:
Minus strand

chr12:64,265,519-64,265,824
(GRCh37/hg19 by Ensembl)
Size:
306 bases
Orientation:
Minus strand

Genomic View for RPL36AP41 Gene

Genes around RPL36AP41 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP41 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP41 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP41 Gene

Proteins for RPL36AP41 Gene

Post-translational modifications for RPL36AP41 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP41 Gene

Domains & Families for RPL36AP41 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL36AP41 Gene

Function for RPL36AP41 Gene

Phenotypes From GWAS Catalog for RPL36AP41 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP41 Gene

Localization for RPL36AP41 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP41 Gene

Pathways & Interactions for RPL36AP41 Gene

PathCards logo

SuperPathways for RPL36AP41 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL36AP41 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL36AP41 Gene

Drugs & Compounds for RPL36AP41 Gene

No Compound Related Data Available

Transcripts for RPL36AP41 Gene

mRNA/cDNA for RPL36AP41 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP41 Gene

No ASD Table

Relevant External Links for RPL36AP41 Gene

GeneLoc Exon Structure for
RPL36AP41

Expression for RPL36AP41 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36AP41 Gene

genes like me logo Genes that share expression patterns with RPL36AP41: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP41 Gene

Orthologs for RPL36AP41 Gene

Evolution for RPL36AP41 Gene

ENSEMBL:
Gene Tree for RPL36AP41 (if available)
TreeFam:
Gene Tree for RPL36AP41 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPL36AP41

No data available for Orthologs for RPL36AP41 Gene

Paralogs for RPL36AP41 Gene

No data available for Paralogs for RPL36AP41 Gene

Variants for RPL36AP41 Gene

Additional Variant Information for RPL36AP41 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP41
Leiden Open Variation Database (LOVD)
RPL36AP41

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP41 Gene

Disorders for RPL36AP41 Gene

No disorders were found for RPL36AP41 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP41 Gene

Publications for RPL36AP41 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL36AP41 Gene

Products for RPL36AP41 Gene

Sources for RPL36AP41 Gene