Aliases for RPL36AP36 Gene

Aliases for RPL36AP36 Gene

  • Ribosomal Protein L36a Pseudogene 36 2 3 5
  • RPL36A_13_1022 3
  • RPL36AP36 5

External Ids for RPL36AP36 Gene

Previous GeneCards Identifiers for RPL36AP36 Gene

  • GC10U901106
  • GC10M013203
  • GC10M013204

Summaries for RPL36AP36 Gene

GeneCards Summary for RPL36AP36 Gene

RPL36AP36 (Ribosomal Protein L36a Pseudogene 36) is a Pseudogene.

Additional gene information for RPL36AP36 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL36AP36 Gene

Genomics for RPL36AP36 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL36AP36 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J013160 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -1.9 -1884 2.6 SP1 CREB1 GATAD2A CTCF ATF7 TEAD4 PRDM10 ZNF629 SIX5 IKZF1 MCM10 RPL36AP36 lnc-CCDC3-6 SEPHS1 OPTN CCDC3 RF00017-592 UCMA
GH10J013158 Promoter/Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas 600.7 +1.2 1216 1.2 ZHX2 POLR2A ZFX ZNF444 CHD1 ELK1 SIN3A ELF1 RCOR1 ZNF687 BTBD7P1 RPL36AP36 lnc-CCDC3-5 lnc-CCDC3-6 MCM10 CCDC3
GH10J013120 Enhancer 0.4 ENCODE 11.9 +38.4 38426 1.2 CEBPB CEBPG ZEB2 SPI1 OPTN CCDC3 BTBD7P1 RPL36AP36 MCM10 ENSG00000228330 ENSG00000234175 lnc-CCDC3-3 SNRPGP5
GH10J013193 Enhancer 0.4 FANTOM5 11.5 -33.7 -33710 0.4 CEBPB CEBPG MCM10 RPL36AP36 BTBD7P1 SEPHS1 RF00017-592 piR-55985-015 UCMA
GH10J013138 Enhancer 0.2 Ensembl 11.7 +20.9 20916 0.6 ENSG00000234175 lnc-CCDC3-3 MCM10 RPL36AP36 OPTN CCDC3 UCMA MIR548Q SNRPGP5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL36AP36 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL36AP36 Gene

Genomic Locations for RPL36AP36 Gene
chr10:13,159,421-13,159,817
(GRCh38/hg38)
Size:
397 bases
Orientation:
Minus strand
chr10:13,201,421-13,201,817
(GRCh37/hg19)
Size:
397 bases
Orientation:
Minus strand

Genomic View for RPL36AP36 Gene

Genes around RPL36AP36 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP36 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP36 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP36 Gene

Proteins for RPL36AP36 Gene

Post-translational modifications for RPL36AP36 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP36 Gene

Domains & Families for RPL36AP36 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL36AP36 Gene

Function for RPL36AP36 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP36 Gene

Localization for RPL36AP36 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP36 Gene

Pathways & Interactions for RPL36AP36 Gene

PathCards logo

SuperPathways for RPL36AP36 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL36AP36 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL36AP36 Gene

Drugs & Compounds for RPL36AP36 Gene

No Compound Related Data Available

Transcripts for RPL36AP36 Gene

mRNA/cDNA for RPL36AP36 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP36 Gene

No ASD Table

Relevant External Links for RPL36AP36 Gene

GeneLoc Exon Structure for
RPL36AP36

Expression for RPL36AP36 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36AP36 Gene

genes like me logo Genes that share expression patterns with RPL36AP36: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP36 Gene

Orthologs for RPL36AP36 Gene

Evolution for RPL36AP36 Gene

ENSEMBL:
Gene Tree for RPL36AP36 (if available)
TreeFam:
Gene Tree for RPL36AP36 (if available)

No data available for Orthologs for RPL36AP36 Gene

Paralogs for RPL36AP36 Gene

No data available for Paralogs for RPL36AP36 Gene

Variants for RPL36AP36 Gene

Additional Variant Information for RPL36AP36 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP36

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP36 Gene

Disorders for RPL36AP36 Gene

No disorders were found for RPL36AP36 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP36 Gene

Publications for RPL36AP36 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL36AP36 Gene

Products for RPL36AP36 Gene

Sources for RPL36AP36 Gene