Aliases for RPL36AP25 Gene

Aliases for RPL36AP25 Gene

  • Ribosomal Protein L36a Pseudogene 25 2 3
  • RPL36A_7_666 3

External Ids for RPL36AP25 Gene

Previous GeneCards Identifiers for RPL36AP25 Gene

  • GC06U901610

Summaries for RPL36AP25 Gene

GeneCards Summary for RPL36AP25 Gene

RPL36AP25 (Ribosomal Protein L36a Pseudogene 25) is a Pseudogene.

Additional gene information for RPL36AP25 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL36AP25 Gene

Genomics for RPL36AP25 Gene

GeneHancer (GH) Regulatory Elements for RPL36AP25 Gene

Promoters and enhancers for RPL36AP25 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J020706 Enhancer 1.1 Ensembl dbSUPER 0.4 +14.8 14768 4 ZSCAN5C TCF12 USF1 SP1 FOS ZNF639 ZNF10 EP300 ZIC2 RELA SOX4 CDKAL1 RPL36AP25 piR-41525-579
GH06J020710 Enhancer 0.9 Ensembl dbSUPER 0.4 +11.4 11368 2.4 NCOR1 ZNF316 MAFF TRIM24 MAFK FOSL1 TAL1 FOS FOXM1 CEBPG RPL36AP25 piR-41525-579 CDKAL1
GH06J020716 Enhancer 0.7 Ensembl 0.4 +5.4 5368 2.4 EP300 MEF2C TRIM22 BCL11A BATF ELF1 IRF4 IKZF1 BMI1 NR2F1 RPL36AP25 piR-41525-579 CDKAL1
GH06J020719 Enhancer 0.5 Ensembl 0.7 +3.4 3368 0.4 ATF2 TCF7 ATF7 CTCF ATF3 E2F1 RPL36AP25 piR-41525-579 CDKAL1
GH06J020718 Enhancer 0.4 Ensembl 0.7 +3.9 3868 0.2 ATF2 ATF7 CTCF ATF3 E2F1 RPL36AP25 piR-41525-579 CDKAL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL36AP25 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36AP25 Gene

Genomic Locations for RPL36AP25 Gene
chr6:20,722,328-20,722,569
(GRCh38/hg38)
Size:
242 bases
Orientation:
Minus strand
chr6:20,722,559-20,723,886
(GRCh37/hg19)
Size:
1,328 bases
Orientation:
Minus strand

Genomic View for RPL36AP25 Gene

Genes around RPL36AP25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP25 Gene

Proteins for RPL36AP25 Gene

Post-translational modifications for RPL36AP25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP25 Gene

Domains & Families for RPL36AP25 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL36AP25 Gene

Function for RPL36AP25 Gene

Phenotypes From GWAS Catalog for RPL36AP25 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP25 Gene

Localization for RPL36AP25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP25 Gene

Pathways & Interactions for RPL36AP25 Gene

PathCards logo

SuperPathways for RPL36AP25 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL36AP25 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL36AP25 Gene

Drugs & Compounds for RPL36AP25 Gene

No Compound Related Data Available

Transcripts for RPL36AP25 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP25 Gene

No ASD Table

Relevant External Links for RPL36AP25 Gene

GeneLoc Exon Structure for
RPL36AP25

No data available for mRNA/cDNA for RPL36AP25 Gene

Expression for RPL36AP25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36AP25 Gene

genes like me logo Genes that share expression patterns with RPL36AP25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP25 Gene

Orthologs for RPL36AP25 Gene

No data available for Orthologs and Evolution for RPL36AP25 Gene

Paralogs for RPL36AP25 Gene

No data available for Paralogs for RPL36AP25 Gene

Variants for RPL36AP25 Gene

Additional Variant Information for RPL36AP25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP25 Gene

Disorders for RPL36AP25 Gene

Additional Disease Information for RPL36AP25

Genetic Association Database
(GAD)

No disorders were found for RPL36AP25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL36AP25 Gene

Publications for RPL36AP25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. Genome-wide association study using extreme truncate selection identifies novel genes affecting bone mineral density and fracture risk. (PMID: 21533022) Duncan EL … Brown MA (PLoS genetics 2011) 41 54

No data available for Mastermind for RPL36AP25 Gene

Products for RPL36AP25 Gene

Sources for RPL36AP25 Gene