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Aliases for RPL36AP13 Gene

Aliases for RPL36AP13 Gene

  • Ribosomal Protein L36a Pseudogene 13 2 3 5
  • RPL36A_3_200 3

External Ids for RPL36AP13 Gene

Previous GeneCards Identifiers for RPL36AP13 Gene

  • GC02U901631
  • GC02P024558
  • GC02P024559

Summaries for RPL36AP13 Gene

GeneCards Summary for RPL36AP13 Gene

RPL36AP13 (Ribosomal Protein L36a Pseudogene 13) is a Pseudogene.

Additional gene information for RPL36AP13 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP13 Gene

Genomics for RPL36AP13 Gene

GeneHancer (GH) Regulatory Elements for RPL36AP13 Gene

Promoters and enhancers for RPL36AP13 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I024332 Enhancer 1 Ensembl ENCODE dbSUPER 550.8 -0.6 -644 1.9 PKNOX1 FOXA2 RXRA TAL1 MAX CBFA2T3 ELF1 YY1 ZNF217 JUND RPL36AP13 ITSN2 TP53I3 FAM228A HMGN2P20 GC02P023754
GH02I024328 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.8 -4.2 -4157 3.9 HDGF MEIS2 PKNOX1 RB1 EBF1 BATF IRF4 ATF7 IKZF2 RUNX3 HMGN2P20 ITSN2 ENSG00000251805 FAM228A RPL36AP13 GC02P023754
GH02I024358 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.3 +25.4 25418 3.1 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 POLR2B ITSN2 LOC105374328 ATAD2B DNMT3A FAM228A TP53I3 RPL36AP13 GC02P023754
GH02I024337 Enhancer 0.6 Ensembl dbSUPER 0.8 +3.5 3489 0.4 CTCF HMBOX1 CBFA2T3 ITSN2 RPL36AP13 GC02P023754
GH02I024342 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +8.6 8552 2 RB1 BACH1 BMI1 BATF RAD21 POLR2A ATF7 IKZF2 RUNX3 SRF ENSG00000251805 ITSN2 FAM228A RPL36AP13 GC02P023754
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL36AP13 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36AP13 Gene

Genomic Locations for RPL36AP13 Gene
chr2:24,334,512-24,335,152
(GRCh38/hg38)
Size:
641 bases
Orientation:
Plus strand
chr2:24,557,381-24,558,021
(GRCh37/hg19)

Genomic View for RPL36AP13 Gene

Genes around RPL36AP13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP13 Gene

Proteins for RPL36AP13 Gene

Post-translational modifications for RPL36AP13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP13 Gene

Domains & Families for RPL36AP13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP13 Gene

Function for RPL36AP13 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP13 Gene

Localization for RPL36AP13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP13 Gene

Pathways & Interactions for RPL36AP13 Gene

SuperPathways for RPL36AP13 Gene

No Data Available

Interacting Proteins for RPL36AP13 Gene

Gene Ontology (GO) - Biological Process for RPL36AP13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP13 Gene

Drugs & Compounds for RPL36AP13 Gene

No Compound Related Data Available

Transcripts for RPL36AP13 Gene

mRNA/cDNA for RPL36AP13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP13 Gene

No ASD Table

Relevant External Links for RPL36AP13 Gene

GeneLoc Exon Structure for
RPL36AP13
ECgene alternative splicing isoforms for
RPL36AP13

Expression for RPL36AP13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36AP13 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP13 Gene:

RPL36AP13
genes like me logo Genes that share expression patterns with RPL36AP13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP13 Gene

Orthologs for RPL36AP13 Gene

Evolution for RPL36AP13 Gene

ENSEMBL:
Gene Tree for RPL36AP13 (if available)
TreeFam:
Gene Tree for RPL36AP13 (if available)

No data available for Orthologs for RPL36AP13 Gene

Paralogs for RPL36AP13 Gene

No data available for Paralogs for RPL36AP13 Gene

Variants for RPL36AP13 Gene

Additional Variant Information for RPL36AP13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP13 Gene

Disorders for RPL36AP13 Gene

Additional Disease Information for RPL36AP13

Genetic Association Database
(GAD)

No disorders were found for RPL36AP13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL36AP13 Gene

Publications for RPL36AP13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci. (PMID: 18978792) Cooper JD … Todd JA (Nature genetics 2008) 44 58

Products for RPL36AP13 Gene

Sources for RPL36AP13 Gene

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