Aliases for RPL36AP10 Gene

Aliases for RPL36AP10 Gene

  • Ribosomal Protein L36a Pseudogene 10 2 3 5
  • RPL36A_1_70 3
  • RPL36AP10 5

External Ids for RPL36AP10 Gene

Previous GeneCards Identifiers for RPL36AP10 Gene

  • GC01U902344
  • GC01P089044

Summaries for RPL36AP10 Gene

GeneCards Summary for RPL36AP10 Gene

RPL36AP10 (Ribosomal Protein L36a Pseudogene 10) is a Pseudogene.

Additional gene information for RPL36AP10 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL36AP10 Gene

Genomics for RPL36AP10 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL36AP10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J088566 Enhancer 0.4 Ensembl 0.4 -11.1 -11145 0.6 SP7 CBX8 RNF2 HSALNG0005021 RPL36AP10 PKN2 PKN2-AS1
GH01J088571 Enhancer 0.3 Ensembl 0.4 -6.0 -6044 0.8 EZH2 RPL36AP10 HSALNG0005021 PKN2 PKN2-AS1
GH01J088562 Enhancer 0.2 Ensembl 0.4 -14.9 -14944 0.2 HSALNG0005021 RPL36AP10 PKN2 PKN2-AS1
GH01J088565 Enhancer 0.2 Ensembl 0.4 -11.8 -11844 0.4 HSALNG0005021 RPL36AP10 PKN2 PKN2-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL36AP10 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL36AP10 Gene

Latest Assembly
chr1:88,577,845-88,578,288
(GRCh38/hg38)
Size:
444 bases
Orientation:
Plus strand

Previous Assembly
chr1:89,043,528-89,043,971
(GRCh37/hg19 by Entrez Gene)
Size:
444 bases
Orientation:
Plus strand

chr1:89,043,563-89,043,884
(GRCh37/hg19 by Ensembl)
Size:
322 bases
Orientation:
Plus strand

Genomic View for RPL36AP10 Gene

Genes around RPL36AP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP10 Gene

Proteins for RPL36AP10 Gene

Post-translational modifications for RPL36AP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP10 Gene

Domains & Families for RPL36AP10 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL36AP10 Gene

Function for RPL36AP10 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP10 Gene

Localization for RPL36AP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP10 Gene

Pathways & Interactions for RPL36AP10 Gene

PathCards logo

SuperPathways for RPL36AP10 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL36AP10 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL36AP10 Gene

Drugs & Compounds for RPL36AP10 Gene

No Compound Related Data Available

Transcripts for RPL36AP10 Gene

mRNA/cDNA for RPL36AP10 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP10 Gene

No ASD Table

Relevant External Links for RPL36AP10 Gene

GeneLoc Exon Structure for
RPL36AP10

Expression for RPL36AP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36AP10 Gene

genes like me logo Genes that share expression patterns with RPL36AP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP10 Gene

Orthologs for RPL36AP10 Gene

Evolution for RPL36AP10 Gene

ENSEMBL:
Gene Tree for RPL36AP10 (if available)
TreeFam:
Gene Tree for RPL36AP10 (if available)

No data available for Orthologs for RPL36AP10 Gene

Paralogs for RPL36AP10 Gene

No data available for Paralogs for RPL36AP10 Gene

Variants for RPL36AP10 Gene

Additional Variant Information for RPL36AP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP10 Gene

Disorders for RPL36AP10 Gene

Additional Disease Information for RPL36AP10

Genetic Association Database
(GAD)

No disorders were found for RPL36AP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL36AP10 Gene

Publications for RPL36AP10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Genome-wide association study identifies loci influencing concentrations of liver enzymes in plasma. (PMID: 22001757) Chambers JC … Kooner JS (Nature genetics 2011) 41
  3. Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PMID: 20881960) Lango Allen H … Hirschhorn JN (Nature 2010) 41
  4. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 41

No data available for Mastermind for RPL36AP10 Gene

Products for RPL36AP10 Gene

Sources for RPL36AP10 Gene