Aliases for RPL35AP6 Gene

Aliases for RPL35AP6 Gene

  • Ribosomal Protein L35a Pseudogene 6 2 3
  • Ribosomal Protein L35a (RPL35A) Pseudogene 5
  • RPL35A_3_191 3
  • AL591848.1 5

External Ids for RPL35AP6 Gene

Previous GeneCards Identifiers for RPL35AP6 Gene

  • GC01U902286
  • GC01M246919

Summaries for RPL35AP6 Gene

GeneCards Summary for RPL35AP6 Gene

RPL35AP6 (Ribosomal Protein L35a Pseudogene 6) is a Pseudogene.

Additional gene information for RPL35AP6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL35AP6 Gene

Genomics for RPL35AP6 Gene

GeneHancer (GH) Regulatory Elements for RPL35AP6 Gene

Promoters and enhancers for RPL35AP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J246754 Enhancer 0.8 Ensembl ENCODE 500.7 +1.9 1932 1 CTCF REST RAD21 TRIM22 SMC3 DEK YY1 SKIL IRF4 DNMT3B RPL35AP6 lnc-AHCTF1-4 ENSG00000260855 SCCPDH piR-60921
GH01J246749 Enhancer 0.8 Ensembl ENCODE 0.4 +6.8 6831 0.4 ESRRA MYC ZNF592 FOS MAX NFE2 FOSL1 JUND E2F6 EHMT2 SCCPDH lnc-AHCTF1-4 RPL35AP6 piR-60921
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL35AP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL35AP6 Gene

Genomic Locations for RPL35AP6 Gene
chr1:246,755,511-246,755,832
(GRCh38/hg38)
Size:
322 bases
Orientation:
Minus strand
chr1:246,918,813-246,919,134
(GRCh37/hg19)
Size:
322 bases
Orientation:
Minus strand

Genomic View for RPL35AP6 Gene

Genes around RPL35AP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL35AP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL35AP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL35AP6 Gene

Proteins for RPL35AP6 Gene

Post-translational modifications for RPL35AP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL35AP6 Gene

Domains & Families for RPL35AP6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL35AP6 Gene

Function for RPL35AP6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL35AP6 Gene

Localization for RPL35AP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL35AP6 Gene

Pathways & Interactions for RPL35AP6 Gene

PathCards logo

SuperPathways for RPL35AP6 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL35AP6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL35AP6 Gene

Drugs & Compounds for RPL35AP6 Gene

No Compound Related Data Available

Transcripts for RPL35AP6 Gene

mRNA/cDNA for RPL35AP6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL35AP6 Gene

No ASD Table

Relevant External Links for RPL35AP6 Gene

GeneLoc Exon Structure for
RPL35AP6

Expression for RPL35AP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL35AP6 Gene

mRNA differential expression in normal tissues according to GTEx for RPL35AP6 Gene

This gene is overexpressed in Nerve - Tibial (x5.4) and Bladder (x5.2).
genes like me logo Genes that share expression patterns with RPL35AP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL35AP6 Gene

Orthologs for RPL35AP6 Gene

Evolution for RPL35AP6 Gene

ENSEMBL:
Gene Tree for RPL35AP6 (if available)
TreeFam:
Gene Tree for RPL35AP6 (if available)

No data available for Orthologs for RPL35AP6 Gene

Paralogs for RPL35AP6 Gene

No data available for Paralogs for RPL35AP6 Gene

Variants for RPL35AP6 Gene

Additional Variant Information for RPL35AP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL35AP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL35AP6 Gene

Disorders for RPL35AP6 Gene

Additional Disease Information for RPL35AP6

Genetic Association Database
(GAD)

No disorders were found for RPL35AP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL35AP6 Gene

Publications for RPL35AP6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

No data available for Mastermind for RPL35AP6 Gene

Products for RPL35AP6 Gene

Sources for RPL35AP6 Gene