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Aliases for RPL35AP17 Gene

Subcategory (RNA class) for RPL35AP17 Gene

antisense

Aliases for RPL35AP17 Gene

  • Ribosomal Protein L35a Pseudogene 17 2 3
  • RPL35A_7_625 3
  • AC091959.1 5

External Ids for RPL35AP17 Gene

ORGUL Members for RPL35AP17 Gene

Previous GeneCards Identifiers for RPL35AP17 Gene

  • GC05U901069
  • GC05P145520

Summaries for RPL35AP17 Gene

GeneCards Summary for RPL35AP17 Gene

RPL35AP17 (Ribosomal Protein L35a Pseudogene 17) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPL35AP17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL35AP17 Gene

Genomics for RPL35AP17 Gene

GeneHancer (GH) Regulatory Elements for RPL35AP17 Gene

Promoters and enhancers for RPL35AP17 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I146137 Promoter/Enhancer 1.4 EPDnew ENCODE 550.8 -0.5 -501 1.4 ELF3 FOXA2 ARID4B RARA ETS1 SCRT2 ATF7 CREM THAP11 MIXL1 GC05M146120 RPL35AP16 RPL35AP17 LARS PLAC8L1
GH05I146138 Promoter 0.6 EPDnew 550.8 -1.7 -1659 0.1 PAF1 RPL35AP16 RPL35AP17 PLAC8L1 GC05M146120 GC05P146115 LARS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL35AP17 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL35AP17 Gene

Genomic Locations for RPL35AP17 Gene
chr5:146,138,761-146,139,008
(GRCh38/hg38)
Size:
248 bases
Orientation:
Plus strand
chr5:145,518,324-145,518,571
(GRCh37/hg19)

Genomic View for RPL35AP17 Gene

Genes around RPL35AP17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL35AP17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL35AP17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL35AP17 Gene

Proteins for RPL35AP17 Gene

Post-translational modifications for RPL35AP17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL35AP17 Gene

Domains & Families for RPL35AP17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL35AP17 Gene

Function for RPL35AP17 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL35AP17 Gene

Localization for RPL35AP17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL35AP17 Gene

Pathways & Interactions for RPL35AP17 Gene

SuperPathways for RPL35AP17 Gene

No Data Available

Interacting Proteins for RPL35AP17 Gene

Gene Ontology (GO) - Biological Process for RPL35AP17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL35AP17 Gene

Drugs & Compounds for RPL35AP17 Gene

No Compound Related Data Available

Transcripts for RPL35AP17 Gene

mRNA/cDNA for RPL35AP17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL35AP17 Gene

No ASD Table

Relevant External Links for RPL35AP17 Gene

GeneLoc Exon Structure for
RPL35AP17
ECgene alternative splicing isoforms for
RPL35AP17

Expression for RPL35AP17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL35AP17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL35AP17 Gene:

RPL35AP17
genes like me logo Genes that share expression patterns with RPL35AP17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL35AP17 Gene

Orthologs for RPL35AP17 Gene

Evolution for RPL35AP17 Gene

ENSEMBL:
Gene Tree for RPL35AP17 (if available)
TreeFam:
Gene Tree for RPL35AP17 (if available)

No data available for Orthologs for RPL35AP17 Gene

Paralogs for RPL35AP17 Gene

No data available for Paralogs for RPL35AP17 Gene

Variants for RPL35AP17 Gene

Additional Variant Information for RPL35AP17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL35AP17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL35AP17 Gene

Disorders for RPL35AP17 Gene

No disorders were found for RPL35AP17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL35AP17 Gene

Publications for RPL35AP17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL35AP17 Gene

Sources for RPL35AP17 Gene

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