Aliases for RPL35AP12 Gene

Aliases for RPL35AP12 Gene

  • Ribosomal Protein L35a Pseudogene 12 2 3 5
  • RPL35A_5_531 3
  • RPL35AP12 5

External Ids for RPL35AP12 Gene

Previous GeneCards Identifiers for RPL35AP12 Gene

  • GC04U901002
  • GC04P164304
  • GC04P160057

Summaries for RPL35AP12 Gene

GeneCards Summary for RPL35AP12 Gene

RPL35AP12 (Ribosomal Protein L35a Pseudogene 12) is a Pseudogene.

Additional gene information for RPL35AP12 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL35AP12 Gene

Genomics for RPL35AP12 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL35AP12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J163380 Enhancer 0.3 Ensembl 600.7 -1.3 -1278 0.2 SPI1 RPL35AP12 lnc-NPY5R-5 NPY1R NPY5R piR-39701-046 TKTL2
GH04J163385 Enhancer 0.6 Ensembl 0.7 +3.4 3422 0.8 CREB1 FOXA1 RFX1 ATF7 ESR1 CTBP1 ESRRA ZNF217 MBD2 GATA3 NPY1R NPY5R RPL35AP12 lnc-NPY5R-5 piR-31846-020 TKTL2
GH04J163415 Enhancer 0.6 Ensembl ENCODE 0.3 +33.9 33865 1.2 USF1 NANOG SP1 POU5F1 piR-31846-020 lnc-NPY5R-5 RPL35AP12 TKTL2 NPY1R
GH04J163402 Enhancer 0.2 Ensembl 0.4 +20.0 20022 0.4 piR-31846-020 RPL35AP12 lnc-NPY5R-5 NPY1R TKTL2
GH04J163403 Enhancer 0.2 Ensembl 0.4 +20.7 20722 0.2 piR-31846-020 RPL35AP12 lnc-NPY5R-5 NPY1R TKTL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL35AP12 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL35AP12 Gene

Genomic Locations for RPL35AP12 Gene
chr4:163,382,179-163,382,516
(GRCh38/hg38)
Size:
338 bases
Orientation:
Plus strand
chr4:164,303,331-164,303,668
(GRCh37/hg19)
Size:
338 bases
Orientation:
Plus strand

Genomic View for RPL35AP12 Gene

Genes around RPL35AP12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL35AP12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL35AP12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL35AP12 Gene

Proteins for RPL35AP12 Gene

Post-translational modifications for RPL35AP12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL35AP12 Gene

Domains & Families for RPL35AP12 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL35AP12 Gene

Function for RPL35AP12 Gene

Phenotypes From GWAS Catalog for RPL35AP12 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL35AP12 Gene

Localization for RPL35AP12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL35AP12 Gene

Pathways & Interactions for RPL35AP12 Gene

PathCards logo

SuperPathways for RPL35AP12 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL35AP12 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL35AP12 Gene

Drugs & Compounds for RPL35AP12 Gene

No Compound Related Data Available

Transcripts for RPL35AP12 Gene

mRNA/cDNA for RPL35AP12 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL35AP12 Gene

No ASD Table

Relevant External Links for RPL35AP12 Gene

GeneLoc Exon Structure for
RPL35AP12

Expression for RPL35AP12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL35AP12 Gene

genes like me logo Genes that share expression patterns with RPL35AP12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL35AP12 Gene

Orthologs for RPL35AP12 Gene

Evolution for RPL35AP12 Gene

ENSEMBL:
Gene Tree for RPL35AP12 (if available)
TreeFam:
Gene Tree for RPL35AP12 (if available)

No data available for Orthologs for RPL35AP12 Gene

Paralogs for RPL35AP12 Gene

No data available for Paralogs for RPL35AP12 Gene

Variants for RPL35AP12 Gene

Additional Variant Information for RPL35AP12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL35AP12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL35AP12 Gene

Disorders for RPL35AP12 Gene

No disorders were found for RPL35AP12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL35AP12 Gene

Publications for RPL35AP12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL35AP12 Gene

Products for RPL35AP12 Gene

Sources for RPL35AP12 Gene