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Aliases for RPL34P9 Gene

Subcategory (RNA class) for RPL34P9 Gene

lncRNA

Aliases for RPL34P9 Gene

  • Ribosomal Protein L34 Pseudogene 9 2 3
  • RPL34_7_396 3
  • AC126182.2 5

External Ids for RPL34P9 Gene

ORGUL Members for RPL34P9 Gene

Previous GeneCards Identifiers for RPL34P9 Gene

  • GC03U901201
  • GC03P120232

Summaries for RPL34P9 Gene

GeneCards Summary for RPL34P9 Gene

RPL34P9 (Ribosomal Protein L34 Pseudogene 9) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL34P9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL34P9 Gene

Genomics for RPL34P9 Gene

GeneHancer (GH) Regulatory Elements for RPL34P9 Gene

Promoters and enhancers for RPL34P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I120446 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 4.5 -63.2 -63218 5.3 KLF17 SIN3A FEZF1 ZNF335 GLIS2 POLR3A ZNF366 KLF7 EGR2 SP3 FSTL1 RPL34P9 MIR198
GH03I120467 Enhancer 1.1 Ensembl ENCODE dbSUPER 6.1 -41.8 -41820 6.2 NCOA3 PKNOX1 JUN NEUROD1 CTBP1 GATA3 RCOR1 FOS MAFK TCF7L2 LRRC58 RPL34P9 ADPRH ENSG00000240774 FSTL1
GH03I120495 Enhancer 1.2 Ensembl ENCODE dbSUPER 4.5 -15.2 -15224 4.4 ZNF449 JUN FEZF1 RFX5 ZEB1 ZNF366 POLR2A PRDM10 RCOR1 ZNF600 RPL34P9 ENSG00000240774
GH03I120487 Enhancer 0.6 ENCODE dbSUPER 6.5 -24.9 -24888 1.8 JUND POLR2A RPL34P9 ENSG00000240774
GH03I120554 Enhancer 0.9 Ensembl ENCODE 4.1 +42.8 42781 2.2 FOXA2 TAF1 MAX RAD21 YY1 HNF4G RXRA REST PPARG FOXA1 RPL34P9 NDUFB4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL34P9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL34P9 Gene

Genomic Locations for RPL34P9 Gene
chr3:120,512,850-120,513,189
(GRCh38/hg38)
Size:
340 bases
Orientation:
Plus strand
chr3:120,231,697-120,232,036
(GRCh37/hg19)

Genomic View for RPL34P9 Gene

Genes around RPL34P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL34P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL34P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL34P9 Gene

Proteins for RPL34P9 Gene

Post-translational modifications for RPL34P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL34P9 Gene

Domains & Families for RPL34P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL34P9 Gene

Function for RPL34P9 Gene

Phenotypes From GWAS Catalog for RPL34P9 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL34P9 Gene

Localization for RPL34P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL34P9 Gene

Pathways & Interactions for RPL34P9 Gene

SuperPathways for RPL34P9 Gene

No Data Available

Interacting Proteins for RPL34P9 Gene

Gene Ontology (GO) - Biological Process for RPL34P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL34P9 Gene

Drugs & Compounds for RPL34P9 Gene

No Compound Related Data Available

Transcripts for RPL34P9 Gene

mRNA/cDNA for RPL34P9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL34P9 Gene

No ASD Table

Relevant External Links for RPL34P9 Gene

GeneLoc Exon Structure for
RPL34P9
ECgene alternative splicing isoforms for
RPL34P9

Expression for RPL34P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL34P9 Gene

mRNA differential expression in normal tissues according to GTEx for RPL34P9 Gene

This gene is overexpressed in Heart - Atrial Appendage (x20.0), Heart - Left Ventricle (x9.5), and Artery - Aorta (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of RPL34P9 Gene:

RPL34P9
genes like me logo Genes that share expression patterns with RPL34P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL34P9 Gene

Orthologs for RPL34P9 Gene

Evolution for RPL34P9 Gene

ENSEMBL:
Gene Tree for RPL34P9 (if available)
TreeFam:
Gene Tree for RPL34P9 (if available)

No data available for Orthologs for RPL34P9 Gene

Paralogs for RPL34P9 Gene

No data available for Paralogs for RPL34P9 Gene

Variants for RPL34P9 Gene

Additional Variant Information for RPL34P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL34P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL34P9 Gene

Disorders for RPL34P9 Gene

No disorders were found for RPL34P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL34P9 Gene

Publications for RPL34P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL34P9 Gene

Sources for RPL34P9 Gene

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