Aliases for RPL34P22 Gene

Aliases for RPL34P22 Gene

  • Ribosomal Protein L34 Pseudogene 22 2 3 5
  • RPL34_12_1141 3
  • RPL34P22 5

External Ids for RPL34P22 Gene

Previous GeneCards Identifiers for RPL34P22 Gene

  • GC11U901258

Summaries for RPL34P22 Gene

GeneCards Summary for RPL34P22 Gene

RPL34P22 (Ribosomal Protein L34 Pseudogene 22) is a Pseudogene.

Additional gene information for RPL34P22 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL34P22 Gene

Genomics for RPL34P22 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL34P22 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J044627 Enhancer 0.8 ENCODE dbSUPER 600.7 -0.9 -867 2.3 IKZF2 RELB RUNX3 FOXA2 NR2F1 SMARCA5 RCOR1 BATF EBF1 TBX21 RPL34P22 lnc-CD82-2 lnc-CD82-3 piR-32214-096 CD82 TSPAN18 lnc-TP53I11-7 MN309347
GH11J044588 Enhancer 1.6 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.6 -32.8 -32837 16.2 KDM1A FOXA1 ZNF143 RELA SMAD5 TCF12 IKZF2 SP1 BRD9 POLR2A CD82 RPL34P22 ENSG00000254693 TSPAN18
GH11J044620 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -8.3 -8286 1.2 CTCF IKZF1 KDM1A ZNF692 POLR2A FOXA1 ZNF143 REST RAD21 IKZF2 CD82 TSPAN18 MN309347 RPL34P22 lnc-CD82-2
GH11J044623 Enhancer 0.7 ENCODE dbSUPER 0.4 -5.4 -5365 1.6 POLR2A BACH1 NR2F2 ZFHX2 SPI1 EGR1 GLIS1 MTA3 EGR2 ETV6 CD82 TSPAN18 RPL34P22 MN309347 lnc-CD82-2
GH11J044621 Enhancer 0.2 Ensembl 0.4 -9.3 -9256 0.2 MN309347 CD82 RPL34P22 lnc-CD82-2 TSPAN18
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL34P22 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL34P22 Gene

Genomic Locations for RPL34P22 Gene
chr11:44,629,357-44,629,674
(GRCh38/hg38)
Size:
318 bases
Orientation:
Plus strand
chr11:44,650,907-44,651,224
(GRCh37/hg19)
Size:
318 bases
Orientation:
Plus strand

Genomic View for RPL34P22 Gene

Genes around RPL34P22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL34P22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL34P22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL34P22 Gene

Proteins for RPL34P22 Gene

Post-translational modifications for RPL34P22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL34P22 Gene

Domains & Families for RPL34P22 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL34P22 Gene

Function for RPL34P22 Gene

Phenotypes From GWAS Catalog for RPL34P22 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL34P22 Gene

Localization for RPL34P22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL34P22 Gene

Pathways & Interactions for RPL34P22 Gene

PathCards logo

SuperPathways for RPL34P22 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL34P22 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL34P22 Gene

Drugs & Compounds for RPL34P22 Gene

No Compound Related Data Available

Transcripts for RPL34P22 Gene

mRNA/cDNA for RPL34P22 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL34P22 Gene

No ASD Table

Relevant External Links for RPL34P22 Gene

GeneLoc Exon Structure for
RPL34P22

Expression for RPL34P22 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL34P22 Gene

mRNA differential expression in normal tissues according to GTEx for RPL34P22 Gene

This gene is overexpressed in Whole Blood (x7.4).
genes like me logo Genes that share expression patterns with RPL34P22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL34P22 Gene

Orthologs for RPL34P22 Gene

Evolution for RPL34P22 Gene

ENSEMBL:
Gene Tree for RPL34P22 (if available)
TreeFam:
Gene Tree for RPL34P22 (if available)

No data available for Orthologs for RPL34P22 Gene

Paralogs for RPL34P22 Gene

No data available for Paralogs for RPL34P22 Gene

Variants for RPL34P22 Gene

Additional Variant Information for RPL34P22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL34P22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL34P22 Gene

Disorders for RPL34P22 Gene

Additional Disease Information for RPL34P22

Genetic Association Database
(GAD)

No disorders were found for RPL34P22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL34P22 Gene

Publications for RPL34P22 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Genome-wide association study identifies a susceptibility locus for schizophrenia in Han Chinese at 11p11.2. (PMID: 22037552) Yue WH … Zhang D (Nature genetics 2011) 41

Products for RPL34P22 Gene

Sources for RPL34P22 Gene