Aliases for RPL31P58 Gene

Aliases for RPL31P58 Gene

  • Ribosomal Protein L31 Pseudogene 58 2 3 5
  • RPL31_32_1533 3
  • RPL31P58 5

External Ids for RPL31P58 Gene

Previous GeneCards Identifiers for RPL31P58 Gene

  • GC17U901168
  • GC17P027130

Summaries for RPL31P58 Gene

GeneCards Summary for RPL31P58 Gene

RPL31P58 (Ribosomal Protein L31 Pseudogene 58) is a Pseudogene.

Additional gene information for RPL31P58 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL31P58 Gene

Genomics for RPL31P58 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL31P58 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J028802 Enhancer 0.8 FANTOM5 Ensembl 600.7 -0.5 -543 1.4 ZNF341 NFIC BCOR TAL1 ADNP HDAC2 TCF12 ZBTB33 LARP7 KDM1A RPL31P58 lnc-TRAF4-1 TRAF4 ERAL1 FAM222B FLOT2 PROCA1 DHRS13 UNC119 RF00017-2319
GH17J028789 Enhancer 1 FANTOM5 Ensembl ENCODE 0.4 -10.6 -10626 4.4 ATF7 ZNF629 FOXA2 ATF2 KDM4B FOXA1 CREM CEBPB ATF3 ATF1 TRAF4 PROCA1 ERAL1 FAM222B TLCD1 NEK8 SNORD42A SNORD4B FLOT2 DHRS13
GH17J028788 Enhancer 0.9 Ensembl ENCODE 0.4 -14.1 -14126 1.8 GATAD2A RCOR2 CEBPA SOX13 TGIF2 FOXA2 ZNF205 TEAD1 SAP130 MIER3 TRAF4 FLOT2 SNORD42A SNORD4B TLCD1 NEK8 DHRS13 RPL31P58 RF00017-2319 piR-60051-041
GH17J028760 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -39.8 -39826 5.2 CTCF PRDM10 JUND LARP7 RELA ZIC2 REST RAD21 IKZF2 RCOR1 TRAF4 TLCD1 SNORD42A SNORD4B NEK8 ERAL1 FAM222B RAB34 RPL23A SNORD42B
GH17J028777 Enhancer 0.7 FANTOM5 Ensembl 0.4 -24.4 -24426 2.8 SCRT2 NFE2 ZNF316 SCRT1 ARNT ZNF18 ZNF362 EMSY PROCA1 TRAF4 ABHD15 SEBOX piR-60051-041 RPL31P58 RF00017-2319 ERAL1 FAM222B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL31P58 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL31P58 Gene

Genomic Locations for RPL31P58 Gene
chr17:28,802,427-28,802,822
(GRCh38/hg38)
Size:
396 bases
Orientation:
Plus strand
chr17:27,129,445-27,129,874
(GRCh37/hg19)
Size:
430 bases
Orientation:
Plus strand

Genomic View for RPL31P58 Gene

Genes around RPL31P58 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P58 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P58 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P58 Gene

Proteins for RPL31P58 Gene

Post-translational modifications for RPL31P58 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P58 Gene

Domains & Families for RPL31P58 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL31P58 Gene

Function for RPL31P58 Gene

Phenotypes From GWAS Catalog for RPL31P58 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P58 Gene

Localization for RPL31P58 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P58 Gene

Pathways & Interactions for RPL31P58 Gene

PathCards logo

SuperPathways for RPL31P58 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL31P58 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL31P58 Gene

Drugs & Compounds for RPL31P58 Gene

No Compound Related Data Available

Transcripts for RPL31P58 Gene

mRNA/cDNA for RPL31P58 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P58 Gene

No ASD Table

Relevant External Links for RPL31P58 Gene

GeneLoc Exon Structure for
RPL31P58

Expression for RPL31P58 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL31P58 Gene

genes like me logo Genes that share expression patterns with RPL31P58: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P58 Gene

Orthologs for RPL31P58 Gene

Evolution for RPL31P58 Gene

ENSEMBL:
Gene Tree for RPL31P58 (if available)
TreeFam:
Gene Tree for RPL31P58 (if available)

No data available for Orthologs for RPL31P58 Gene

Paralogs for RPL31P58 Gene

No data available for Paralogs for RPL31P58 Gene

Variants for RPL31P58 Gene

Additional Variant Information for RPL31P58 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P58

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P58 Gene

Disorders for RPL31P58 Gene

No disorders were found for RPL31P58 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL31P58 Gene

Publications for RPL31P58 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL31P58 Gene

Products for RPL31P58 Gene

Sources for RPL31P58 Gene