Aliases for RPL31P57 Gene

Aliases for RPL31P57 Gene

  • Ribosomal Protein L31 Pseudogene 57 2 3 5
  • RPL31_21_1570 3
  • HCG1793136 3
  • RPL31P57 5

External Ids for RPL31P57 Gene

Previous GeneCards Identifiers for RPL31P57 Gene

  • GC17M059741
  • GC17M062386

Summaries for RPL31P57 Gene

GeneCards Summary for RPL31P57 Gene

RPL31P57 (Ribosomal Protein L31 Pseudogene 57) is a Pseudogene.

Additional gene information for RPL31P57 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL31P57 Gene

Genomics for RPL31P57 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL31P57 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J064306 Enhancer 0.9 Ensembl ENCODE 250.7 +0.3 316 3.6 ZNF654 CTCF REST DEK TRIM22 BHLHE40 RAD21 SMC3 USF2 ZNF205 RPL31P57 TEX2 ERN1 HSALNG0118086 PECAM1
GH17J064320 Enhancer 1 ENCODE dbSUPER 0.4 -10.1 -10130 0.1 CEBPA CHD4 KMT2B THAP11 FOXA2 SMAD4 ZNF511 SAP130 MIER3 RARA ERN1 RF00017-2253 RPL31P57 HSALNG0118086 TEX2 PECAM1
GH17J064321 Enhancer 1 ENCODE dbSUPER 0.4 -12.6 -12606 1.3 ZNF654 IKZF1 ZNF592 CEBPA CTCF CEBPB REST TRIM22 FOXA2 RAD21 RF00017-2253 TEX2 lnc-TEX2-2 RPL31P57 HSALNG0118086 PECAM1
GH17J064319 Enhancer 1 ENCODE dbSUPER 0.4 -10.0 -10034 0 CEBPA KMT2B THAP11 FOXA2 SMAD4 ZNF511 SAP130 MIER3 RARA TEAD3 RF00017-2253 RPL31P57 HSALNG0118086 TEX2 PECAM1
GH17J064302 Enhancer 0.9 Ensembl ENCODE 0.4 +5.8 5765 1.7 ZMYM3 CEBPA CHD4 CTBP1 MLLT1 SIN3A KDM1A ZNF217 SMARCE1 ZNF384 RPL31P57 HSALNG0118086 TEX2 PECAM1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL31P57 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL31P57 Gene

Latest Assembly
chr17:64,308,316-64,308,716
(GRCh38/hg38)
Size:
401 bases
Orientation:
Minus strand

Previous Assembly
chr17:62,385,705-62,386,076
(GRCh37/hg19 by Entrez Gene)
Size:
372 bases
Orientation:
Minus strand

chr17:62,385,676-62,386,050
(GRCh37/hg19 by Ensembl)
Size:
375 bases
Orientation:
Minus strand

Genomic View for RPL31P57 Gene

Genes around RPL31P57 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P57 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P57 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P57 Gene

Proteins for RPL31P57 Gene

Post-translational modifications for RPL31P57 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P57 Gene

Domains & Families for RPL31P57 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL31P57 Gene

Function for RPL31P57 Gene

Phenotypes From GWAS Catalog for RPL31P57 Gene

Phenotypes for RPL31P57 Gene

genes like me logo Genes that share phenotypes with RPL31P57: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P57 Gene

Localization for RPL31P57 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P57 Gene

Pathways & Interactions for RPL31P57 Gene

PathCards logo

SuperPathways for RPL31P57 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL31P57 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL31P57 Gene

Drugs & Compounds for RPL31P57 Gene

No Compound Related Data Available

Transcripts for RPL31P57 Gene

mRNA/cDNA for RPL31P57 Gene

1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P57 Gene

No ASD Table

Relevant External Links for RPL31P57 Gene

GeneLoc Exon Structure for
RPL31P57

Expression for RPL31P57 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL31P57 Gene

genes like me logo Genes that share expression patterns with RPL31P57: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P57 Gene

Orthologs for RPL31P57 Gene

Evolution for RPL31P57 Gene

ENSEMBL:
Gene Tree for RPL31P57 (if available)
TreeFam:
Gene Tree for RPL31P57 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPL31P57

No data available for Orthologs for RPL31P57 Gene

Paralogs for RPL31P57 Gene

No data available for Paralogs for RPL31P57 Gene

Variants for RPL31P57 Gene

Additional Variant Information for RPL31P57 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P57
Leiden Open Variation Database (LOVD)
RPL31P57

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P57 Gene

Disorders for RPL31P57 Gene

No disorders were found for RPL31P57 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL31P57 Gene

Publications for RPL31P57 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3

No data available for Mastermind for RPL31P57 Gene

Products for RPL31P57 Gene

Sources for RPL31P57 Gene