Aliases for RPL31P48 Gene

Aliases for RPL31P48 Gene

  • Ribosomal Protein L31 Pseudogene 48 2 3
  • Ribosomal Protein L31 (RPL31) Pseudogene 5
  • RPL31_25_1257 3
  • AC087879.1 5

External Ids for RPL31P48 Gene

Previous GeneCards Identifiers for RPL31P48 Gene

  • GC12U901068
  • GC12P074043

Summaries for RPL31P48 Gene

GeneCards Summary for RPL31P48 Gene

RPL31P48 (Ribosomal Protein L31 Pseudogene 48) is a Pseudogene.

Additional gene information for RPL31P48 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL31P48 Gene

Genomics for RPL31P48 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL31P48 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J073630 Enhancer 0.6 Ensembl ENCODE 0.4 -17.9 -17943 0.6 POLR2A RAD21 SMARCA4 POU5F1 EZH2 RPL31P48 RF00017-1187 LINC02882 ATXN7L3B
GH12J073629 Enhancer 0.3 Ensembl 0.4 -18.9 -18939 1 CTCF RPL31P48 RF00017-1187 LINC02882 ATXN7L3B
GH12J073631 Enhancer 0.2 Ensembl 0.4 -17.0 -17039 0.8 RPL31P48 RF00017-1187 LINC02882 ATXN7L3B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL31P48 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL31P48 Gene

Genomic Locations for RPL31P48 Gene
chr12:73,648,640-73,649,086
(GRCh38/hg38)
Size:
447 bases
Orientation:
Plus strand
chr12:74,042,420-74,042,866
(GRCh37/hg19)
Size:
447 bases
Orientation:
Plus strand

Genomic View for RPL31P48 Gene

Genes around RPL31P48 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P48 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P48 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P48 Gene

Proteins for RPL31P48 Gene

Post-translational modifications for RPL31P48 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P48 Gene

Domains & Families for RPL31P48 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL31P48 Gene

Function for RPL31P48 Gene

Phenotypes From GWAS Catalog for RPL31P48 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P48 Gene

Localization for RPL31P48 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P48 Gene

Pathways & Interactions for RPL31P48 Gene

PathCards logo

SuperPathways for RPL31P48 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL31P48 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL31P48 Gene

Drugs & Compounds for RPL31P48 Gene

No Compound Related Data Available

Transcripts for RPL31P48 Gene

mRNA/cDNA for RPL31P48 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P48 Gene

No ASD Table

Relevant External Links for RPL31P48 Gene

GeneLoc Exon Structure for
RPL31P48

Expression for RPL31P48 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL31P48 Gene

genes like me logo Genes that share expression patterns with RPL31P48: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P48 Gene

Orthologs for RPL31P48 Gene

Evolution for RPL31P48 Gene

ENSEMBL:
Gene Tree for RPL31P48 (if available)
TreeFam:
Gene Tree for RPL31P48 (if available)

No data available for Orthologs for RPL31P48 Gene

Paralogs for RPL31P48 Gene

No data available for Paralogs for RPL31P48 Gene

Variants for RPL31P48 Gene

Additional Variant Information for RPL31P48 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P48

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P48 Gene

Disorders for RPL31P48 Gene

Additional Disease Information for RPL31P48

Genetic Association Database
(GAD)

No disorders were found for RPL31P48 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL31P48 Gene

Publications for RPL31P48 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 41
  4. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 41
  5. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41

No data available for Mastermind for RPL31P48 Gene

Products for RPL31P48 Gene

Sources for RPL31P48 Gene