Aliases for RPL31P46 Gene

Aliases for RPL31P46 Gene

  • Ribosomal Protein L31 Pseudogene 46 2 3
  • Ribosomal Protein L31 (RPL31) Pseudogene 5
  • RPL31_23_1157 3
  • AP001992.1 5

External Ids for RPL31P46 Gene

Previous GeneCards Identifiers for RPL31P46 Gene

  • GC11U901296
  • GC11P074631
  • GC11P074634
  • GC11P074905
  • GC11P074964
  • GC11P075501
  • GC11P075554
  • GC11P075556
  • GC11P075715
  • GC11P074998
  • GC11P075118
  • GC11P075174
  • GC11P075227
  • GC11P075291
  • GC11P075344
  • GC11P075395
  • GC11P075448

Summaries for RPL31P46 Gene

GeneCards Summary for RPL31P46 Gene

RPL31P46 (Ribosomal Protein L31 Pseudogene 46) is a Pseudogene.

Additional gene information for RPL31P46 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL31P46 Gene

Genomics for RPL31P46 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL31P46 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J074695 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 9.2 -179.4 -179382 2.3 REST IKZF1 PKNOX1 MTA1 IRF2 SP1 CEBPA CEBPB SMARCC1 SMARCC2 RPL31P46 XRRA1 PAAF1 ENSG00000279353 lnc-XRRA1-2 lnc-POLD3-8 CHRDL2 POLD3
GH11J075154 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.1 +301.5 301472 46.9 HNRNPL CREB1 GATAD2A ATF7 REST TFE3 RFX1 SOX13 NFKBIZ RCOR2 SLCO2B1 P4HA3 POLD3 ENSG00000206913 RN7SL239P ENSG00000255395 NEU3 XRRA1 ARRB1 RPL31P46
GH11J074739 Enhancer 0.9 Ensembl ENCODE 7.8 -136.3 -136328 0.5 GATAD2A CTCF TEAD4 FOXA1 ZNF143 REST RAD21 IRF2 TRIM22 CEBPA RPL36AP38 lnc-CHRDL2-2 RPL31P46 CHRDL2 RNF169 piR-58029-001
GH11J074818 Enhancer 0.8 Ensembl ENCODE 5.9 -55.7 -55685 6 CREB1 ZNF24 JUND CEBPB HDAC2 FOS TEAD1 FOSL1 ZNF592 DPF2 XRRA1 RNF169 ENSG00000227615 RANP3 RPL31P46 MN297091 piR-38344-019 lnc-XRRA1-1
GH11J074725 Enhancer 1.1 Ensembl ENCODE dbSUPER 4.2 -150.0 -150035 2.1 CTCF RFX5 JUND ZNF143 ZNF24 REST RAD21 TRIM22 SCRT2 NRF1 XRRA1 RNF169 RPL31P46 CHRDL2 MIR4696 POLD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL31P46 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL31P46 Gene

Genomic Locations for RPL31P46 Gene
chr11:74,876,286-74,920,022
(GRCh38/hg38)
Size:
43,737 bases
Orientation:
Plus strand
chr11:74,630,620-74,631,051
(GRCh37/hg19)
Size:
432 bases
Orientation:
Plus strand

Genomic View for RPL31P46 Gene

Genes around RPL31P46 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P46 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P46 Gene

Proteins for RPL31P46 Gene

Post-translational modifications for RPL31P46 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P46 Gene

Domains & Families for RPL31P46 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL31P46 Gene

Function for RPL31P46 Gene

Phenotypes From GWAS Catalog for RPL31P46 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P46 Gene

Localization for RPL31P46 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P46 Gene

Pathways & Interactions for RPL31P46 Gene

PathCards logo

SuperPathways for RPL31P46 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL31P46 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL31P46 Gene

Drugs & Compounds for RPL31P46 Gene

No Compound Related Data Available

Transcripts for RPL31P46 Gene

mRNA/cDNA for RPL31P46 Gene

6 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P46 Gene

No ASD Table

Relevant External Links for RPL31P46 Gene

GeneLoc Exon Structure for
RPL31P46

Expression for RPL31P46 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL31P46 Gene

genes like me logo Genes that share expression patterns with RPL31P46: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P46 Gene

Orthologs for RPL31P46 Gene

Evolution for RPL31P46 Gene

ENSEMBL:
Gene Tree for RPL31P46 (if available)
TreeFam:
Gene Tree for RPL31P46 (if available)

No data available for Orthologs for RPL31P46 Gene

Paralogs for RPL31P46 Gene

No data available for Paralogs for RPL31P46 Gene

Variants for RPL31P46 Gene

Additional Variant Information for RPL31P46 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P46

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P46 Gene

Disorders for RPL31P46 Gene

No disorders were found for RPL31P46 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL31P46 Gene

Publications for RPL31P46 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL31P46 Gene

Products for RPL31P46 Gene

Sources for RPL31P46 Gene