Aliases for RPL31P43 Gene

Aliases for RPL31P43 Gene

  • Ribosomal Protein L31 Pseudogene 43 2 3
  • Ribosomal Protein L31 (RPL31) Pseudogene 5
  • RPL31_21_1004 3
  • AC068050.1 5

External Ids for RPL31P43 Gene

Previous GeneCards Identifiers for RPL31P43 Gene

  • GC09P109842
  • GC09P110804

Summaries for RPL31P43 Gene

GeneCards Summary for RPL31P43 Gene

RPL31P43 (Ribosomal Protein L31 Pseudogene 43) is a Pseudogene.

Additional gene information for RPL31P43 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL31P43 Gene

Genomics for RPL31P43 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL31P43 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J108039 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 250.7 +0.7 674 3.6 JUND CEBPB BHLHE40 EP300 USF2 NFE2 IRF9 SMARCE1 EGR1 ATF4 RPL31P43 lnc-RAD23B-18 HSALNG0073551 KLF4 lnc-ACTL7B-11 ACTL7B
GH09J108883 Enhancer 1.1 Ensembl ENCODE 4.6 +846.2 846234 8.1 BCLAF1 ZNF654 SSRP1 POLR2A CEBPA ATF3 NFIC YY1 MXD4 REST CTNNAL1 ELP1 FRRS1L ACTL7A ACTL7B ABITRAM EPB41L4B TMEM245 RPL31P43 NONHSAG053162.2
GH09J108034 Enhancer 0.7 Ensembl ENCODE 0.4 -5.2 -5167 2 ZNF664 BHLHE40 EGR2 PRDM10 FOS CEBPB ZFHX2 ZNF335 lnc-RAD23B-16 piR-48553-336 RPL31P43 lnc-RAD23B-17 KLF4 lnc-ACTL7B-11 ACTL7B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL31P43 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL31P43 Gene

Latest Assembly
chr9:108,040,185-108,040,592
(GRCh38/hg38)
Size:
408 bases
Orientation:
Plus strand

Previous Assembly
chr9:110,802,466-110,802,843
(GRCh37/hg19 by Entrez Gene)
Size:
378 bases
Orientation:
Plus strand

chr9:110,802,494-110,802,873
(GRCh37/hg19 by Ensembl)
Size:
380 bases
Orientation:
Plus strand

Genomic View for RPL31P43 Gene

Genes around RPL31P43 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P43 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P43 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P43 Gene

Proteins for RPL31P43 Gene

Post-translational modifications for RPL31P43 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P43 Gene

Domains & Families for RPL31P43 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL31P43 Gene

Function for RPL31P43 Gene

Phenotypes From GWAS Catalog for RPL31P43 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P43 Gene

Localization for RPL31P43 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P43 Gene

Pathways & Interactions for RPL31P43 Gene

PathCards logo

SuperPathways for RPL31P43 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL31P43 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL31P43 Gene

Drugs & Compounds for RPL31P43 Gene

No Compound Related Data Available

Transcripts for RPL31P43 Gene

mRNA/cDNA for RPL31P43 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P43 Gene

No ASD Table

Relevant External Links for RPL31P43 Gene

GeneLoc Exon Structure for
RPL31P43

Expression for RPL31P43 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL31P43 Gene

mRNA differential expression in normal tissues according to GTEx for RPL31P43 Gene

This gene is overexpressed in Testis (x10.8), Skin - Sun Exposed (Lower leg) (x6.8), and Whole Blood (x5.7).
genes like me logo Genes that share expression patterns with RPL31P43: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P43 Gene

Orthologs for RPL31P43 Gene

Evolution for RPL31P43 Gene

ENSEMBL:
Gene Tree for RPL31P43 (if available)
TreeFam:
Gene Tree for RPL31P43 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPL31P43

No data available for Orthologs for RPL31P43 Gene

Paralogs for RPL31P43 Gene

No data available for Paralogs for RPL31P43 Gene

Variants for RPL31P43 Gene

Additional Variant Information for RPL31P43 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P43
Leiden Open Variation Database (LOVD)
RPL31P43

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P43 Gene

Disorders for RPL31P43 Gene

No disorders were found for RPL31P43 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL31P43 Gene

Publications for RPL31P43 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs JB … Dupuis J (BMC medical genetics 2007) 40
  3. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 40
  4. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 40
  5. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 40

Products for RPL31P43 Gene

Sources for RPL31P43 Gene