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Aliases for RPL31P43 Gene
Aliases for RPL31P43 Gene
External Ids for RPL31P43 Gene
- HGNC: 36512
- Entrez Gene: 392382
- Ensembl: ENSG00000213557
Previous GeneCards Identifiers for RPL31P43 Gene
- GC09P109842
- GC09P110804
Summaries for RPL31P43 Gene
GeneCards Summary for RPL31P43 Gene
RPL31P43 (Ribosomal Protein L31 Pseudogene 43) is a Pseudogene.
Additional gene information for RPL31P43 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL31P43 Gene
Genomics for RPL31P43 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL31P43 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH09J108039 | Enhancer | 1.3 | FANTOM5 Ensembl ENCODE dbSUPER | 600.7 | +0.7 | 674 | 3.6 | CEBPG JUND CEBPB MGA SP1 EGR1 CTBP1 NFE2 NR3C1 JUN | RPL31P43 lnc-RAD23B-18 LOC105376213 lnc-ACTL7B-11 KLF4 ACTL7B | |
| GH09J108883 | Enhancer | 1.1 | Ensembl ENCODE | 4.6 | +846.2 | 846234 | 8.1 | HNRNPL GATAD2A ATF7 TFE3 SOX13 NFKBIZ RCOR2 POLR2A JUND STAT3 | CTNNAL1 ELP1 FRRS1L ACTL7A ACTL7B ABITRAM EPB41L4B TMEM245 RPL31P43 NONHSAG053162.2 | |
| GH09J108034 | Enhancer | 0.7 | Ensembl ENCODE | 0.4 | -5.2 | -5169 | 2 | PRDM10 CEBPB FOS ZFHX2 ZNF335 BHLHE40 ZNF664 EGR2 | lnc-RAD23B-16 piR-48553-336 RPL31P43 lnc-RAD23B-17 lnc-ACTL7B-11 KLF4 ACTL7B |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL31P43 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL31P43 Gene
Genomic Locations for RPL31P43 Gene
- chr9:108,040,185-108,040,592
- (GRCh38/hg38)
- Size:
- 408 bases
- Orientation:
- Plus strand
- chr9:110,802,466-110,802,911
- (GRCh37/hg19)
- Size:
- 446 bases
- Orientation:
- Plus strand
Genomic View for RPL31P43 Gene
Genes around RPL31P43 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 9q31.2 by HGNC
- 9q31.2 by Entrez Gene
- 9q31.2 by Ensembl
RPL31P43 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL31P43 Gene
Proteins for RPL31P43 Gene
Post-translational modifications for RPL31P43 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL31P43
- Origene Custom Protein Services for RPL31P43
No data available for DME Specific Peptides for RPL31P43 Gene
Domains & Families for RPL31P43 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL31P43 Gene
Function for RPL31P43 Gene
Phenotypes From GWAS Catalog for RPL31P43 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL31P43 - Select products 50% OFF >
- * RPL31P43 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL31P43
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P43 Gene
Localization for RPL31P43 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P43 Gene
Transcripts for RPL31P43 Gene
mRNA/cDNA for RPL31P43 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000394891 380 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL31P43 - Select products 50% OFF >
- * RPL31P43 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL31P43
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for RPL31P43 Gene
- GeneLoc Exon Structure for
- RPL31P43
Expression for RPL31P43 Gene
mRNA differential expression in normal tissues according to GTEx for RPL31P43 Gene
This gene is overexpressed in Testis (x10.8), Skin - Sun Exposed (Lower leg) (x6.8), and Whole Blood (x5.7).
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P43 Gene
Orthologs for RPL31P43 Gene
No data available for Orthologs for RPL31P43 Gene
Paralogs for RPL31P43 Gene
No data available for Paralogs for RPL31P43 Gene
Variants for RPL31P43 Gene
Additional Variant Information for RPL31P43 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL31P43
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P43 Gene
Disorders for RPL31P43 Gene
Additional Disease Information for RPL31P43
- Genetic Association Database
- (GAD)
No disorders were found for RPL31P43 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL31P43 Gene
Publications for RPL31P43 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
- Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 41
- Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 41
- Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 41
- Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 41
ExternalLinks
Products for RPL31P43 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL31P43
- Origene Custom Protein Services for RPL31P43
- Browse OriGene Inhibitory RNA Products For RPL31P43
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL31P43
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL31P43
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL31P43
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL31P43
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL31P43
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL31P43
Sources for RPL31P43 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB