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RPL31P43 Gene(Pseudogene)

Ribosomal Protein L31 Pseudogene 43

GCID:
GC09P108040
GIFtS:
11
Genes Participants
UDN Logo

Aliases for RPL31P43 Gene

Aliases for RPL31P43 Gene

  • Ribosomal Protein L31 Pseudogene 43 2 3
  • RPL31_21_1004 3
  • AC068050.1 5

External Ids for RPL31P43 Gene

Previous GeneCards Identifiers for RPL31P43 Gene

  • GC09P109842
  • GC09P110804

Summaries for RPL31P43 Gene

GeneCards Summary for RPL31P43 Gene

RPL31P43 (Ribosomal Protein L31 Pseudogene 43) is a Pseudogene.

Additional gene information for RPL31P43 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL31P43 Gene

Genomics for RPL31P43 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPL31P43 Gene

Promoters and enhancers for RPL31P43 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH09I108039 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.7 674 3.6 JUN CEBPG IRF9 FOSL1 GATA3 CTBP1 EGR1 RCOR1 CBFA2T2 FOSL2 RPL31P43 LOC105376213
GH09I108883 Enhancer 1 ENCODE 4.6 +846.2 846234 8.1 FOXA2 SMAD1 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 TCF12 SLC30A9 CTNNAL1 ELP1 FRRS1L ACTL7A ACTL7B FAM206A EPB41L4B TMEM245 RPL31P43
GH09I108055 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.8 16842 3.3 FOXA2 SIN3A RAD21 ZBTB40 RFX5 RCOR1 FOS CEBPB ELF1 REST RPL31P43 LOC105376213 LOC105376214
GH09I108048 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +9.4 9385 2.7 PKNOX1 ATF1 FEZF1 TCF12 ZNF766 FOS ATF7 REST TSHZ1 ZNF592 RPL31P43 LOC105376213 LOC105376214
GH09I108053 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +13.8 13849 2.1 PKNOX1 FEZF1 ZNF2 RCOR1 USF2 CEBPB ZEB2 ZNF518A ZNF843 ZFP69B RPL31P43 LOC105376213 LOC105376214
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL31P43 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL31P43 Gene

Genomic Locations for RPL31P43 Gene
chr9:108,040,185-108,040,630
(GRCh38/hg38)
Size:
446 bases
Orientation:
Plus strand
chr9:110,802,466-110,802,911
(GRCh37/hg19)

Genomic View for RPL31P43 Gene

Genes around RPL31P43 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P43 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P43 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL31P43 Gene

Proteins for RPL31P43 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL31P43 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P43 Gene

Domains & Families for RPL31P43 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL31P43 Gene

Function for RPL31P43 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPL31P43 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P43 Gene

Localization for RPL31P43 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P43 Gene

Pathways & Interactions for RPL31P43 Gene

SuperPathways for RPL31P43 Gene

PathCards logo More details on SuperPathways for RPL31P43
No Data Available

Interacting Proteins for RPL31P43 Gene

Gene Ontology (GO) - Biological Process for RPL31P43 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL31P43 Gene

Drugs & Compounds for RPL31P43 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL31P43 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL31P43 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P43 Gene

No ASD Table

Relevant External Links for RPL31P43 Gene

GeneLoc Exon Structure for
RPL31P43
ECgene alternative splicing isoforms for
RPL31P43

Expression for RPL31P43 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL31P43 Gene

mRNA expression in normal human tissues for RPL31P43 Gene
mRNA expression by GTEx for RPL31P43 Gene

mRNA differential expression in normal tissues according to GTEx for RPL31P43 Gene

This gene is overexpressed in Testis (x10.8), Skin - Sun Exposed (Lower leg) (x6.8), and Whole Blood (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL31P43 Gene:

RPL31P43
genes like me logo Genes that share expression patterns with RPL31P43: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P43 Gene

Orthologs for RPL31P43 Gene

Evolution for RPL31P43 Gene

ENSEMBL:
Gene Tree for RPL31P43 (if available)
TreeFam:
Gene Tree for RPL31P43 (if available)

No data available for Orthologs for RPL31P43 Gene

Paralogs for RPL31P43 Gene

No data available for Paralogs for RPL31P43 Gene

Variants for RPL31P43 Gene

Additional Variant Information for RPL31P43 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P43

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P43 Gene

Disorders for RPL31P43 Gene

Additional Disease Information for RPL31P43

Genetic Association Database
(GAD)

No disorders were found for RPL31P43 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL31P43 Gene

Publications for RPL31P43 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 44 58
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58
  4. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs JB … Dupuis J (BMC medical genetics 2007) 44 58
  5. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 44 58

Products for RPL31P43 Gene

Sources for RPL31P43 Gene

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