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Aliases for RPL31P29 Gene

Subcategory (RNA class) for RPL31P29 Gene

lncRNA

Aliases for RPL31P29 Gene

  • Ribosomal Protein L31 Pseudogene 29 2 3
  • RPL31_9_773 3
  • AL591419.1 5

External Ids for RPL31P29 Gene

ORGUL Members for RPL31P29 Gene

Previous GeneCards Identifiers for RPL31P29 Gene

  • GC06U901634
  • GC06M154927

Summaries for RPL31P29 Gene

GeneCards Summary for RPL31P29 Gene

RPL31P29 (Ribosomal Protein L31 Pseudogene 29) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL31P29 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL31P29 Gene

Genomics for RPL31P29 Gene

GeneHancer (GH) Regulatory Elements for RPL31P29 Gene

Promoters and enhancers for RPL31P29 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I154606 Enhancer 1.1 FANTOM5 ENCODE 550.8 -0.6 -642 0.4 HDGF PKNOX1 SMAD1 BMI1 BATF KLF5 EGR1 ZNF207 ZNF143 ATF7 RPL31P29 CNKSR3 SCAF8 GC06P154648
GH06I154605 Enhancer 0.7 ENCODE 550.8 +0.5 532 0.2 PKNOX1 BACH1 EBF1 BATF ZSCAN5C NFATC1 ATF7 IKZF2 RUNX3 CBFB RPL31P29 GC06P154578
GH06I154612 Enhancer 1.2 Ensembl ENCODE 0.4 -8.6 -8589 3.1 HDGF PKNOX1 FEZF1 ZNF2 CBX5 ZNF213 FOS KLF13 SP3 REST SCAF8 CNKSR3 RPL31P29 GC06P154648
GH06I154592 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +12.6 12602 1.5 BCOR MEIS2 LEF1 PKNOX1 MZF1 CEBPG FOSL1 ZNF213 ZNF547 VEZF1 CNKSR3 RPL31P29 GC06P154578
GH06I154590 Enhancer 0.6 ENCODE 0.4 +15.0 14952 0.2 FOXA2 NFIB FOXA1 ZNF217 GATA3 CTBP1 FOS HNF4A GC06P154578 RPL31P29
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL31P29 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL31P29 Gene

Genomic Locations for RPL31P29 Gene
chr6:154,605,616-154,605,954
(GRCh38/hg38)
Size:
339 bases
Orientation:
Minus strand
chr6:154,926,750-154,927,088
(GRCh37/hg19)

Genomic View for RPL31P29 Gene

Genes around RPL31P29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P29 Gene

Proteins for RPL31P29 Gene

Post-translational modifications for RPL31P29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P29 Gene

Domains & Families for RPL31P29 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL31P29 Gene

Function for RPL31P29 Gene

Phenotypes From GWAS Catalog for RPL31P29 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P29 Gene

Localization for RPL31P29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P29 Gene

Pathways & Interactions for RPL31P29 Gene

SuperPathways for RPL31P29 Gene

No Data Available

Interacting Proteins for RPL31P29 Gene

Gene Ontology (GO) - Biological Process for RPL31P29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL31P29 Gene

Drugs & Compounds for RPL31P29 Gene

No Compound Related Data Available

Transcripts for RPL31P29 Gene

mRNA/cDNA for RPL31P29 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P29 Gene

No ASD Table

Relevant External Links for RPL31P29 Gene

GeneLoc Exon Structure for
RPL31P29
ECgene alternative splicing isoforms for
RPL31P29

Expression for RPL31P29 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL31P29 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL31P29 Gene:

RPL31P29
genes like me logo Genes that share expression patterns with RPL31P29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P29 Gene

Orthologs for RPL31P29 Gene

Evolution for RPL31P29 Gene

ENSEMBL:
Gene Tree for RPL31P29 (if available)
TreeFam:
Gene Tree for RPL31P29 (if available)

No data available for Orthologs for RPL31P29 Gene

Paralogs for RPL31P29 Gene

No data available for Paralogs for RPL31P29 Gene

Variants for RPL31P29 Gene

Additional Variant Information for RPL31P29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P29 Gene

Disorders for RPL31P29 Gene

No disorders were found for RPL31P29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL31P29 Gene

Publications for RPL31P29 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL31P29 Gene

Sources for RPL31P29 Gene

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