Aliases for RPL31P28 Gene

Aliases for RPL31P28 Gene

  • Ribosomal Protein L31 Pseudogene 28 2 3 5
  • RPL31_12_703 3
  • RPL31P28 5

External Ids for RPL31P28 Gene

Previous GeneCards Identifiers for RPL31P28 Gene

  • GC06P053327
  • GC06P053220

Summaries for RPL31P28 Gene

GeneCards Summary for RPL31P28 Gene

RPL31P28 (Ribosomal Protein L31 Pseudogene 28) is a Pseudogene.

Additional gene information for RPL31P28 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL31P28 Gene

Genomics for RPL31P28 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL31P28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J053352 Enhancer 0.6 Ensembl dbSUPER 600.7 -1.0 -960 0.6 ZNF24 CBX2 WT1 CEBPG CEBPB IKZF1 RPL31P28 ENSG00000249379 ELOVL5 ENSG00000271367 GCLC MN298114-205
GH06J053354 Enhancer 0.3 dbSUPER 600.7 +0.9 881 1.6 ZBTB33 RPL31P28 ELOVL5 lnc-FBXO9-7 GCLC MN298114-205
GH06J053240 Enhancer 1.1 Ensembl ENCODE dbSUPER 15.9 -109.0 -108961 15 PRDM1 ZNF24 TCF12 IKZF2 EED CEBPB DPF2 RELB ZNF10 RUNX3 RPL31P28 ELOVL5 RF00017-5601 lnc-FBXO9-2 GCM1 MN298114-205 CILK1
GH06J053306 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 11.9 -44.2 -44216 8.1 GATAD2A ZNF629 REST LEF1 IKZF1 RCOR2 BACH1 JUND FOXA1 STAT3 EFHC1 ELOVL5 RPL31P28 FBXO9 piR-43583-476 LOC107986604 lnc-GCM1-4 GCM1 MN298114-205
GH06J053436 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.2 +84.1 84130 6.8 CREB1 CTCF BACH1 JUND POLR2A REST RAD21 IKZF2 TRIM22 DPF2 RPL31P28 ELOVL5 piR-38580-284 NANOGP3 GCLC MN298114-205
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL31P28 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL31P28 Gene

Genomic Locations for RPL31P28 Gene
chr6:53,354,661-53,355,065
(GRCh38/hg38)
Size:
405 bases
Orientation:
Plus strand
chr6:53,219,459-53,219,904
(GRCh37/hg19)
Size:
446 bases
Orientation:
Plus strand

Genomic View for RPL31P28 Gene

Genes around RPL31P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P28 Gene

Proteins for RPL31P28 Gene

Post-translational modifications for RPL31P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P28 Gene

Domains & Families for RPL31P28 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL31P28 Gene

Function for RPL31P28 Gene

Phenotypes From GWAS Catalog for RPL31P28 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P28 Gene

Localization for RPL31P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P28 Gene

Pathways & Interactions for RPL31P28 Gene

PathCards logo

SuperPathways for RPL31P28 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL31P28 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL31P28 Gene

Drugs & Compounds for RPL31P28 Gene

No Compound Related Data Available

Transcripts for RPL31P28 Gene

mRNA/cDNA for RPL31P28 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P28 Gene

No ASD Table

Relevant External Links for RPL31P28 Gene

GeneLoc Exon Structure for
RPL31P28

Expression for RPL31P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL31P28 Gene

mRNA differential expression in normal tissues according to GTEx for RPL31P28 Gene

This gene is overexpressed in Testis (x41.8).
genes like me logo Genes that share expression patterns with RPL31P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P28 Gene

Orthologs for RPL31P28 Gene

Evolution for RPL31P28 Gene

ENSEMBL:
Gene Tree for RPL31P28 (if available)
TreeFam:
Gene Tree for RPL31P28 (if available)

No data available for Orthologs for RPL31P28 Gene

Paralogs for RPL31P28 Gene

No data available for Paralogs for RPL31P28 Gene

Variants for RPL31P28 Gene

Additional Variant Information for RPL31P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P28 Gene

Disorders for RPL31P28 Gene

No disorders were found for RPL31P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL31P28 Gene

Publications for RPL31P28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL31P28 Gene

Products for RPL31P28 Gene

Sources for RPL31P28 Gene