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Aliases for RPL31P16 Gene

Subcategory (RNA class) for RPL31P16 Gene

lncRNA

Aliases for RPL31P16 Gene

  • Ribosomal Protein L31 Pseudogene 16 2 3
  • RPL31_3_207 3
  • AC007390.1 5

External Ids for RPL31P16 Gene

ORGUL Members for RPL31P16 Gene

Previous GeneCards Identifiers for RPL31P16 Gene

  • GC02M037276
  • GC02M037422
  • GC02M037426
  • GC02M037431
  • GC02M037436
  • GC02M037440

Summaries for RPL31P16 Gene

GeneCards Summary for RPL31P16 Gene

RPL31P16 (Ribosomal Protein L31 Pseudogene 16) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL31P16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL31P16 Gene

Genomics for RPL31P16 Gene

GeneHancer (GH) Regulatory Elements for RPL31P16 Gene

Promoters and enhancers for RPL31P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I037154 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 11 +38.2 38239 3.1 HDGF PKNOX1 SMAD1 FOXA2 ARID4B SIN3A DMAP1 BRCA1 ZNF48 ZNF766 EIF2AK2 NDUFAF7 ENSG00000272054 RPL31P16 CEBPZOS SULT6B1 CEBPZ ENSG00000224891
GH02I037149 Enhancer 0.6 ENCODE 11 +44.8 44822 1.2 NFYC FEZF1 ZNF843 GABPA PRDM6 HMBOX1 MAFK ZNF18 ENSG00000224891 RPL31P16 CEBPZOS SULT6B1 CEBPZ NDUFAF7 EIF2AK2 STRN
GH02I037189 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 +4.6 4647 1.6 ELF3 FOXA2 ARID4B RAD21 RARA SLC30A9 ZNF335 SCRT2 FOS THAP11 EIF2AK2 NDUFAF7 CEBPZOS CEBPZ RPL31P16 SULT6B1
GH02I037181 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +12.9 12876 1.6 HDAC1 JUN TEAD4 BACH1 ZBTB40 FOSL1 GATA3 ZNF316 CBFA2T2 NFE2 NDUFAF7 EIF2AK2 CEBPZOS CEBPZ RNU6-939P SULT6B1 PRKD3 RPL31P16
GH02I037191 Enhancer 0.4 dbSUPER 0.8 +3.0 3046 1.1 FOXA2 ZNF680 ZNF449 EIF2AK2 SULT6B1 RPL31P16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL31P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL31P16 Gene

Genomic Locations for RPL31P16 Gene
chr2:37,194,379-37,194,759
(GRCh38/hg38)
Size:
381 bases
Orientation:
Minus strand
chr2:37,421,236-37,421,902
(GRCh37/hg19)

Genomic View for RPL31P16 Gene

Genes around RPL31P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P16 Gene

Proteins for RPL31P16 Gene

Post-translational modifications for RPL31P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P16 Gene

Domains & Families for RPL31P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL31P16 Gene

Function for RPL31P16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P16 Gene

Localization for RPL31P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P16 Gene

Pathways & Interactions for RPL31P16 Gene

SuperPathways for RPL31P16 Gene

No Data Available

Interacting Proteins for RPL31P16 Gene

Gene Ontology (GO) - Biological Process for RPL31P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL31P16 Gene

Drugs & Compounds for RPL31P16 Gene

No Compound Related Data Available

Transcripts for RPL31P16 Gene

mRNA/cDNA for RPL31P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P16 Gene

No ASD Table

Relevant External Links for RPL31P16 Gene

GeneLoc Exon Structure for
RPL31P16
ECgene alternative splicing isoforms for
RPL31P16

Expression for RPL31P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL31P16 Gene

mRNA differential expression in normal tissues according to GTEx for RPL31P16 Gene

This gene is overexpressed in Testis (x39.5) and Whole Blood (x10.2).

NURSA nuclear receptor signaling pathways regulating expression of RPL31P16 Gene:

RPL31P16
genes like me logo Genes that share expression patterns with RPL31P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P16 Gene

Orthologs for RPL31P16 Gene

Evolution for RPL31P16 Gene

ENSEMBL:
Gene Tree for RPL31P16 (if available)
TreeFam:
Gene Tree for RPL31P16 (if available)

No data available for Orthologs for RPL31P16 Gene

Paralogs for RPL31P16 Gene

No data available for Paralogs for RPL31P16 Gene

Variants for RPL31P16 Gene

Additional Variant Information for RPL31P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P16 Gene

Disorders for RPL31P16 Gene

No disorders were found for RPL31P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL31P16 Gene

Publications for RPL31P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL31P16 Gene

Sources for RPL31P16 Gene

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