Aliases for RPL31P13 Gene

Aliases for RPL31P13 Gene

  • Ribosomal Protein L31 Pseudogene 13 2 3 5
  • RPL31_2_164 3
  • RPL31P13 5

External Ids for RPL31P13 Gene

Previous GeneCards Identifiers for RPL31P13 Gene

  • GC01U902346
  • GC01M213603

Summaries for RPL31P13 Gene

GeneCards Summary for RPL31P13 Gene

RPL31P13 (Ribosomal Protein L31 Pseudogene 13) is a Pseudogene.

Additional gene information for RPL31P13 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL31P13 Gene

Genomics for RPL31P13 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL31P13 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J213424 Enhancer 0.7 VISTA UCNEbase 0.7 +3.7 3676 1.6 RPL31P13 RF01061-021 LOC105372912 RPS6KC1 PROX1
GH01J213443 Enhancer 0.4 Ensembl 0.4 -14.5 -14506 0.8 FOS JUND TCF7L2 piR-60051-004 RPL31P13 LOC105372912 RPS6KC1 PROX1
GH01J213431 Enhancer 0.2 FANTOM5 0.7 -2.8 -2796 0.2 RPL31P13 piR-60051-004 LOC105372912 RPS6KC1 PROX1
GH01J213435 Enhancer 0.2 Ensembl 0.4 -6.8 -6824 0.6 RPL31P13 piR-60051-004 LOC105372912 RPS6KC1 PROX1
GH01J213415 Enhancer 0.2 ENCODE 0.4 +13.1 13105 1.1 RF01061-021 RPL31P13 LOC105372912 RPS6KC1 PROX1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL31P13 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL31P13 Gene

Genomic Locations for RPL31P13 Gene
chr1:213,428,708-213,429,077
(GRCh38/hg38)
Size:
370 bases
Orientation:
Minus strand
chr1:213,602,051-213,602,420
(GRCh37/hg19)
Size:
370 bases
Orientation:
Minus strand

Genomic View for RPL31P13 Gene

Genes around RPL31P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P13 Gene

Proteins for RPL31P13 Gene

Post-translational modifications for RPL31P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P13 Gene

Domains & Families for RPL31P13 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL31P13 Gene

Function for RPL31P13 Gene

Phenotypes From GWAS Catalog for RPL31P13 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P13 Gene

Localization for RPL31P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P13 Gene

Pathways & Interactions for RPL31P13 Gene

PathCards logo

SuperPathways for RPL31P13 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL31P13 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL31P13 Gene

Drugs & Compounds for RPL31P13 Gene

No Compound Related Data Available

Transcripts for RPL31P13 Gene

mRNA/cDNA for RPL31P13 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P13 Gene

No ASD Table

Relevant External Links for RPL31P13 Gene

GeneLoc Exon Structure for
RPL31P13

Expression for RPL31P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL31P13 Gene

genes like me logo Genes that share expression patterns with RPL31P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P13 Gene

Orthologs for RPL31P13 Gene

Evolution for RPL31P13 Gene

ENSEMBL:
Gene Tree for RPL31P13 (if available)
TreeFam:
Gene Tree for RPL31P13 (if available)

No data available for Orthologs for RPL31P13 Gene

Paralogs for RPL31P13 Gene

No data available for Paralogs for RPL31P13 Gene

Variants for RPL31P13 Gene

Additional Variant Information for RPL31P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P13 Gene

Disorders for RPL31P13 Gene

Additional Disease Information for RPL31P13

Genetic Association Database
(GAD)

No disorders were found for RPL31P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL31P13 Gene

Publications for RPL31P13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. A comprehensive genetic association study of Alzheimer disease in African Americans. (PMID: 22159054) Logue MW … Multi-Institutional Research on Alzheimer Genetic Epidemiology (MIRAGE) Study Group (Archives of neurology 2011) 41
  3. New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk. (PMID: 20081858) Dupuis J … Barroso I (Nature genetics 2010) 41
  4. A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project. (PMID: 20031603) Marroni F … EUROSPAN Consortium (Circulation. Cardiovascular genetics 2009) 41
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 41

Products for RPL31P13 Gene

Sources for RPL31P13 Gene