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Aliases for RPL31P12 Gene
External Ids for RPL31P12 Gene
- HGNC: 35546
- NCBI Entrez Gene: 100270887
- Ensembl: ENSG00000227207
Previous GeneCards Identifiers for RPL31P12 Gene
- GC01U902380
- GC01P072768
Summaries for RPL31P12 Gene
GeneCards Summary for RPL31P12 Gene
RPL31P12 (Ribosomal Protein L31 Pseudogene 12) is a Pseudogene.
Additional gene information for RPL31P12 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL31P12 Gene
Genomics for RPL31P12 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL31P12 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J072281 | Promoter/Enhancer | 2.3 | EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER | 24.4 | -18.1 | -18126 | 7.4 | BCL11A CTCF ZIC2 ZNF610 CEBPB SIN3A IRF4 EP300 ZNF341 PRDM1 | NEGR1 ENSG00000286863 LOC105378797 RPL31P12 HSALNG0004423 | |
| GH01J072397 | Enhancer | 0.4 | Ensembl ENCODE | 15.9 | +96.5 | 96523 | 0.6 | CEBPB | RPL31P12 HSALNG0004424 piR-37895-006 LOC105378797 ENSG00000286863 NEGR1 | |
| GH01J072288 | Enhancer | 0.3 | Ensembl | 24.4 | -12.1 | -12145 | 1.8 | SPI1 | RPL31P12 ENSG00000286863 NEGR1 LOC105378797 HSALNG0004423 | |
| GH01J072111 | Enhancer | 0.3 | Ensembl | 15 | -189.3 | -189344 | 1.4 | SPI1 POLR2A | RPL31P12 HSALNG0004420 HSALNG0004419 NEGR1 | |
| GH01J072438 | Enhancer | 0.3 | Ensembl | 15.5 | +137.7 | 137655 | 1.8 | CEBPB | RPL31P12 piR-37895-006 LOC105378796 ENSG00000286863 LOC105378797 NEGR1 ENSG00000225087 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL31P12 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL31P12 Gene
Latest Assembly
- chr1:72,301,445-72,301,871
- (GRCh38/hg38)
- Size:
- 427 bases
- Orientation:
- Plus strand
Previous Assembly
- chr1:72,767,128-72,767,554
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 427 bases
- Orientation:
- Plus strand
- chr1:72,767,155-72,767,512
- (GRCh37/hg19 by Ensembl)
- Size:
- 358 bases
- Orientation:
- Plus strand
Genomic View for RPL31P12 Gene
Genes around RPL31P12 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p31.1 by HGNC
- 1p31.1 by Entrez Gene
- 1p31.1 by Ensembl
RPL31P12 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL31P12 Gene
Proteins for RPL31P12 Gene
Post-translational modifications for RPL31P12 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL31P12
- Origene Custom Protein Services for RPL31P12
Assay products for research
No data available for DME Specific Peptides for RPL31P12 Gene
Domains & Families for RPL31P12 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL31P12 Gene
Function for RPL31P12 Gene
Phenotypes From GWAS Catalog for RPL31P12 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPL31P12 - Starting at $85 >
- * RPL31P12 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPL31P12
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P12 Gene
Localization for RPL31P12 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P12 Gene
Transcripts for RPL31P12 Gene
mRNA/cDNA for RPL31P12 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000422587 358 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPL31P12 - Starting at $85 >
- * RPL31P12 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPL31P12
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for RPL31P12 Gene
- GeneLoc Exon Structure for
- RPL31P12
Expression for RPL31P12 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P12 Gene
Orthologs for RPL31P12 Gene
No data available for Orthologs for RPL31P12 Gene
Paralogs for RPL31P12 Gene
No data available for Paralogs for RPL31P12 Gene
Variants for RPL31P12 Gene
Additional Variant Information for RPL31P12 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL31P12
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P12 Gene
Disorders for RPL31P12 Gene
Additional Disease Information for RPL31P12
- Genetic Association Database
- (GAD)
No disorders were found for RPL31P12 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL31P12 Gene
Publications for RPL31P12 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
- Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. (PMID: 20935630) Speliotes EK … Loos RJ (Nature genetics 2010) 41
- Six new loci associated with body mass index highlight a neuronal influence on body weight regulation. (PMID: 19079261) Willer CJ … Genetic Investigation of ANthropometric Traits Consortium (Nature genetics 2009) 41
- Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 41
- Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 41
ExternalLinks
Products for RPL31P12 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL31P12
- Origene Custom Protein Services for RPL31P12
- Browse OriGene Inhibitory RNA Products For RPL31P12
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL31P12
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL31P12
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL31P12
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL31P12
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL31P12
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL31P12
Sources for RPL31P12 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB