Aliases for RPL31P12 Gene

Aliases for RPL31P12 Gene

  • Ribosomal Protein L31 Pseudogene 12 2 3 5
  • RPL31_1_62 3
  • RPL31P12 5

External Ids for RPL31P12 Gene

Previous GeneCards Identifiers for RPL31P12 Gene

  • GC01U902380
  • GC01P072768

Summaries for RPL31P12 Gene

GeneCards Summary for RPL31P12 Gene

RPL31P12 (Ribosomal Protein L31 Pseudogene 12) is a Pseudogene.

Additional gene information for RPL31P12 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL31P12 Gene

Genomics for RPL31P12 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL31P12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J072281 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 24.4 -18.1 -18126 7.4 BCL11A CTCF ZIC2 ZNF610 CEBPB SIN3A IRF4 EP300 ZNF341 PRDM1 NEGR1 ENSG00000286863 LOC105378797 RPL31P12 HSALNG0004423
GH01J072397 Enhancer 0.4 Ensembl ENCODE 15.9 +96.5 96523 0.6 CEBPB RPL31P12 HSALNG0004424 piR-37895-006 LOC105378797 ENSG00000286863 NEGR1
GH01J072288 Enhancer 0.3 Ensembl 24.4 -12.1 -12145 1.8 SPI1 RPL31P12 ENSG00000286863 NEGR1 LOC105378797 HSALNG0004423
GH01J072111 Enhancer 0.3 Ensembl 15 -189.3 -189344 1.4 SPI1 POLR2A RPL31P12 HSALNG0004420 HSALNG0004419 NEGR1
GH01J072438 Enhancer 0.3 Ensembl 15.5 +137.7 137655 1.8 CEBPB RPL31P12 piR-37895-006 LOC105378796 ENSG00000286863 LOC105378797 NEGR1 ENSG00000225087
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL31P12 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL31P12 Gene

Latest Assembly
chr1:72,301,445-72,301,871
(GRCh38/hg38)
Size:
427 bases
Orientation:
Plus strand

Previous Assembly
chr1:72,767,128-72,767,554
(GRCh37/hg19 by Entrez Gene)
Size:
427 bases
Orientation:
Plus strand

chr1:72,767,155-72,767,512
(GRCh37/hg19 by Ensembl)
Size:
358 bases
Orientation:
Plus strand

Genomic View for RPL31P12 Gene

Genes around RPL31P12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL31P12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL31P12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL31P12 Gene

Proteins for RPL31P12 Gene

Post-translational modifications for RPL31P12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL31P12 Gene

Domains & Families for RPL31P12 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL31P12 Gene

Function for RPL31P12 Gene

Phenotypes From GWAS Catalog for RPL31P12 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL31P12 Gene

Localization for RPL31P12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL31P12 Gene

Pathways & Interactions for RPL31P12 Gene

PathCards logo

SuperPathways for RPL31P12 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL31P12 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL31P12 Gene

Drugs & Compounds for RPL31P12 Gene

No Compound Related Data Available

Transcripts for RPL31P12 Gene

mRNA/cDNA for RPL31P12 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL31P12 Gene

No ASD Table

Relevant External Links for RPL31P12 Gene

GeneLoc Exon Structure for
RPL31P12

Expression for RPL31P12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL31P12 Gene

genes like me logo Genes that share expression patterns with RPL31P12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL31P12 Gene

Orthologs for RPL31P12 Gene

Evolution for RPL31P12 Gene

ENSEMBL:
Gene Tree for RPL31P12 (if available)
TreeFam:
Gene Tree for RPL31P12 (if available)

No data available for Orthologs for RPL31P12 Gene

Paralogs for RPL31P12 Gene

No data available for Paralogs for RPL31P12 Gene

Variants for RPL31P12 Gene

Additional Variant Information for RPL31P12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL31P12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL31P12 Gene

Disorders for RPL31P12 Gene

Additional Disease Information for RPL31P12

Genetic Association Database
(GAD)

No disorders were found for RPL31P12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL31P12 Gene

Publications for RPL31P12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. (PMID: 20935630) Speliotes EK … Loos RJ (Nature genetics 2010) 41
  3. Six new loci associated with body mass index highlight a neuronal influence on body weight regulation. (PMID: 19079261) Willer CJ … Genetic Investigation of ANthropometric Traits Consortium (Nature genetics 2009) 41
  4. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 41
  5. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 41

Products for RPL31P12 Gene

Sources for RPL31P12 Gene