Aliases for RPL30P9 Gene

Aliases for RPL30P9 Gene

  • Ribosomal Protein L30 Pseudogene 9 2 3 5
  • RPL30_5_882 3
  • RPL30P9 5

External Ids for RPL30P9 Gene

Previous GeneCards Identifiers for RPL30P9 Gene

  • GC08U901138
  • GC08M019971

Summaries for RPL30P9 Gene

GeneCards Summary for RPL30P9 Gene

RPL30P9 (Ribosomal Protein L30 Pseudogene 9) is a Pseudogene.

Additional gene information for RPL30P9 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL30P9 Gene

Genomics for RPL30P9 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL30P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J020113 Enhancer 0.5 ENCODE 600.7 -0.4 -373 0.2 CTCF REST RAD21 FOS SMC3 BHLHE40 ZNF654 ZNF83 RPL30P9 lnc-SLC18A1-1 ENSG00000253775 INTS10 L13714-426 LOC105379311 SLC18A1 LPL
GH08J020111 Enhancer 0.4 ENCODE 600.7 +1.8 1767 0.2 CEBPB MAX HLF LOC105379310 RPL30P9 lnc-SLC18A1-1 ENSG00000253775 INTS10 LOC105379311 SLC18A1 LPL
GH08J020115 Enhancer 0.3 Ensembl ENCODE 600.7 -1.8 -1835 1 RPL30P9 lnc-SLC18A1-1 ENSG00000253775 INTS10 CSGALNACT1 L13714-426 LOC105379311 SLC18A1 LPL
GH08J020112 Promoter 0.3 Ensembl 600.7 +0.7 671 0.4 RPL30P9 lnc-SLC18A1-1 ENSG00000253775 INTS10 LOC105379310 LOC105379311 SLC18A1 LPL
GH08J020109 Promoter 0.3 Ensembl 0.7 +3.5 3471 0.8 LOC105379310 ENSG00000253775 INTS10 RPL30P9 lnc-SLC18A1-1 LOC105379311 SLC18A1 LPL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL30P9 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL30P9 Gene

Genomic Locations for RPL30P9 Gene
chr8:20,113,336-20,113,672
(GRCh38/hg38)
Size:
337 bases
Orientation:
Minus strand
chr8:19,970,847-19,971,183
(GRCh37/hg19)
Size:
337 bases
Orientation:
Minus strand

Genomic View for RPL30P9 Gene

Genes around RPL30P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL30P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL30P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL30P9 Gene

Proteins for RPL30P9 Gene

Post-translational modifications for RPL30P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL30P9 Gene

Domains & Families for RPL30P9 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL30P9 Gene

Function for RPL30P9 Gene

Phenotypes From GWAS Catalog for RPL30P9 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL30P9 Gene

Localization for RPL30P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL30P9 Gene

Pathways & Interactions for RPL30P9 Gene

PathCards logo

SuperPathways for RPL30P9 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL30P9 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL30P9 Gene

Drugs & Compounds for RPL30P9 Gene

No Compound Related Data Available

Transcripts for RPL30P9 Gene

mRNA/cDNA for RPL30P9 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL30P9 Gene

No ASD Table

Relevant External Links for RPL30P9 Gene

GeneLoc Exon Structure for
RPL30P9

Expression for RPL30P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL30P9 Gene

genes like me logo Genes that share expression patterns with RPL30P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL30P9 Gene

Orthologs for RPL30P9 Gene

Evolution for RPL30P9 Gene

ENSEMBL:
Gene Tree for RPL30P9 (if available)
TreeFam:
Gene Tree for RPL30P9 (if available)

No data available for Orthologs for RPL30P9 Gene

Paralogs for RPL30P9 Gene

No data available for Paralogs for RPL30P9 Gene

Variants for RPL30P9 Gene

Additional Variant Information for RPL30P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL30P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL30P9 Gene

Disorders for RPL30P9 Gene

Additional Disease Information for RPL30P9

Genetic Association Database
(GAD)

No disorders were found for RPL30P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL30P9 Gene

Publications for RPL30P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPL30P9 Gene

Sources for RPL30P9 Gene