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Aliases for RPL30P9 Gene
External Ids for RPL30P9 Gene
- HGNC: 35763
- NCBI Entrez Gene: 100270981
- Ensembl: ENSG00000242709
Previous GeneCards Identifiers for RPL30P9 Gene
- GC08U901138
- GC08M019971
Summaries for RPL30P9 Gene
GeneCards Summary for RPL30P9 Gene
RPL30P9 (Ribosomal Protein L30 Pseudogene 9) is a Pseudogene.
Additional gene information for RPL30P9 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL30P9 Gene
Genomics for RPL30P9 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL30P9 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH08J020113 | Enhancer | 0.5 | ENCODE | 250.7 | -0.4 | -373 | 0.2 | CTCF REST RAD21 SMC3 BHLHE40 FOS ZNF654 | RPL30P9 lnc-SLC18A1-1 ENSG00000253775 INTS10 L13714-423 LOC105379311 SLC18A1 LPL | |
| GH08J020111 | Enhancer | 0.4 | ENCODE | 250.7 | +1.8 | 1767 | 0.2 | CEBPB MAX HLF | LOC105379310 RPL30P9 lnc-SLC18A1-1 ENSG00000253775 INTS10 LOC105379311 SLC18A1 LPL | |
| GH08J020112 | Promoter | 0.3 | Ensembl | 250.7 | +0.7 | 671 | 0.4 | RPL30P9 lnc-SLC18A1-1 ENSG00000253775 INTS10 LOC105379310 LOC105379311 SLC18A1 LPL | ||
| GH08J020115 | Enhancer | 0.2 | ENCODE | 250.7 | -1.8 | -1801 | 0.9 | RPL30P9 lnc-SLC18A1-1 ENSG00000253775 INTS10 CSGALNACT1 L13714-423 LOC105379311 SLC18A1 LPL |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL30P9 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL30P9 Gene
Latest Assembly
- chr8:20,113,336-20,113,672
- (GRCh38/hg38)
- Size:
- 337 bases
- Orientation:
- Minus strand
Previous Assembly
- chr8:19,970,847-19,971,168
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 322 bases
- Orientation:
- Minus strand
- chr8:19,970,854-19,971,183
- (GRCh37/hg19 by Ensembl)
- Size:
- 330 bases
- Orientation:
- Minus strand
Genomic View for RPL30P9 Gene
Genes around RPL30P9 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 8p21.3 by HGNC
- 8p21.3 by Entrez Gene
- 8p21.3 by Ensembl
RPL30P9 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL30P9 Gene
Proteins for RPL30P9 Gene
Post-translational modifications for RPL30P9 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL30P9
- Origene Custom Protein Services for RPL30P9
Assay products for research
No data available for DME Specific Peptides for RPL30P9 Gene
Domains & Families for RPL30P9 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL30P9 Gene
Function for RPL30P9 Gene
Phenotypes From GWAS Catalog for RPL30P9 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPL30P9 - Starting at $85 >
- * RPL30P9 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPL30P9
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL30P9 Gene
Localization for RPL30P9 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL30P9 Gene
Transcripts for RPL30P9 Gene
mRNA/cDNA for RPL30P9 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000465586 330 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPL30P9 - Starting at $85 >
- * RPL30P9 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPL30P9
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for RPL30P9 Gene
- GeneLoc Exon Structure for
- RPL30P9
Expression for RPL30P9 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL30P9 Gene
Orthologs for RPL30P9 Gene
No data available for Orthologs for RPL30P9 Gene
Paralogs for RPL30P9 Gene
No data available for Paralogs for RPL30P9 Gene
Variants for RPL30P9 Gene
Additional Variant Information for RPL30P9 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL30P9
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL30P9 Gene
Disorders for RPL30P9 Gene
Additional Disease Information for RPL30P9
- Genetic Association Database
- (GAD)
No disorders were found for RPL30P9 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL30P9 Gene
Publications for RPL30P9 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
ExternalLinks
Products for RPL30P9 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL30P9
- Origene Custom Protein Services for RPL30P9
- Browse OriGene Inhibitory RNA Products For RPL30P9
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL30P9
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL30P9
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL30P9
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL30P9
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL30P9
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL30P9
Sources for RPL30P9 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB