Aliases for RPL30P5 Gene

Aliases for RPL30P5 Gene

  • Ribosomal Protein L30 Pseudogene 5 2 3 5
  • RPL30_2_497 3
  • RPL30P5 5

External Ids for RPL30P5 Gene

Previous GeneCards Identifiers for RPL30P5 Gene

  • GC04U901032
  • GC04P084424

Summaries for RPL30P5 Gene

GeneCards Summary for RPL30P5 Gene

RPL30P5 (Ribosomal Protein L30 Pseudogene 5) is a Pseudogene.

Additional gene information for RPL30P5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL30P5 Gene

Genomics for RPL30P5 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL30P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J083504 Enhancer 0.3 Ensembl ENCODE 600.7 +1.8 1802 1.8 RPL30P5 lnc-GPAT3-1 GPAT3 MRPS18C HELQ piR-47274-001 ABRAXAS1 lnc-ABRAXAS1-2
GH04J083509 Enhancer 0.8 Ensembl 0.4 +6.6 6616 0.6 ARHGAP35 CTCF ZNF512 IKZF1 ZNF143 REST RAD21 ZNF24 BRD9 TRIM22 piR-47274-001 RPL30P5 lnc-GPAT3-1 ABRAXAS1 lnc-ABRAXAS1-2 MRPS18C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL30P5 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL30P5 Gene

Genomic Locations for RPL30P5 Gene
chr4:83,502,699-83,503,034
(GRCh38/hg38)
Size:
336 bases
Orientation:
Plus strand
chr4:84,423,852-84,424,187
(GRCh37/hg19)
Size:
336 bases
Orientation:
Plus strand

Genomic View for RPL30P5 Gene

Genes around RPL30P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL30P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL30P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL30P5 Gene

Proteins for RPL30P5 Gene

Post-translational modifications for RPL30P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL30P5 Gene

Domains & Families for RPL30P5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL30P5 Gene

Function for RPL30P5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL30P5 Gene

Localization for RPL30P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL30P5 Gene

Pathways & Interactions for RPL30P5 Gene

PathCards logo

SuperPathways for RPL30P5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL30P5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL30P5 Gene

Drugs & Compounds for RPL30P5 Gene

No Compound Related Data Available

Transcripts for RPL30P5 Gene

mRNA/cDNA for RPL30P5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL30P5 Gene

No ASD Table

Relevant External Links for RPL30P5 Gene

GeneLoc Exon Structure for
RPL30P5

Expression for RPL30P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL30P5 Gene

genes like me logo Genes that share expression patterns with RPL30P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL30P5 Gene

Orthologs for RPL30P5 Gene

Evolution for RPL30P5 Gene

ENSEMBL:
Gene Tree for RPL30P5 (if available)
TreeFam:
Gene Tree for RPL30P5 (if available)

No data available for Orthologs for RPL30P5 Gene

Paralogs for RPL30P5 Gene

No data available for Paralogs for RPL30P5 Gene

Variants for RPL30P5 Gene

Additional Variant Information for RPL30P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL30P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL30P5 Gene

Disorders for RPL30P5 Gene

No disorders were found for RPL30P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL30P5 Gene

Publications for RPL30P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL30P5 Gene

Products for RPL30P5 Gene

Sources for RPL30P5 Gene