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Aliases for RPL29P6 Gene

Aliases for RPL29P6 Gene

  • Ribosomal Protein L29 Pseudogene 6 2 3
  • RPL29_1_20 3
  • AL109936.1 5

External Ids for RPL29P6 Gene

Previous GeneCards Identifiers for RPL29P6 Gene

  • GC01P023445
  • GC01P023572

Summaries for RPL29P6 Gene

GeneCards Summary for RPL29P6 Gene

RPL29P6 (Ribosomal Protein L29 Pseudogene 6) is a Pseudogene.

Additional gene information for RPL29P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL29P6 Gene

Genomics for RPL29P6 Gene

GeneHancer (GH) Regulatory Elements for RPL29P6 Gene

Promoters and enhancers for RPL29P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I023244 Enhancer 0.5 FANTOM5 550.8 -0.2 -166 0.4 BCOR ZFHX2 EGR2 GC01P023245 RPL29P6 HTR1D
GH01I023193 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 -48.5 -48544 6.3 NFIB RCOR1 FOS DEK MCM3 ZNF362 SMARCC1 CEBPB SP1 MAFF HTR1D SRSF10 ZBTB40 PNRC2 RPL11 RNU6-514P RNU6-135P ELOA LUZP1 LACTBL1
GH01I023215 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 -27.8 -27814 2 RB1 SIN3A RAD21 ZNF335 GLIS2 SCRT2 ZNF143 ATF7 ZNF174 SMARCC1 HTR1D KDM1A RNU6-135P RNU6-514P TCEA3 LACTBL1 RPL29P6
GH01I023224 Enhancer 0.8 Ensembl ENCODE 0.4 -19.6 -19558 1.4 NFIA MAX CEBPB ZMYM3 GTF3C2 GATA3 CTBP1 POLR3A POLR2A IKZF1 KDM1A LACTBL1 LUZP1 HTR1D RPL29P6
GH01I023210 Enhancer 0.6 ENCODE 0.3 -34.3 -34296 0.2 SMARCA5 BCOR CTCF ZMYM3 NFXL1 RAD21 ZNF143 KLF9 ZFP36 SMC3 LUZP1 HTR1D RPL29P6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL29P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL29P6 Gene

Genomic Locations for RPL29P6 Gene
chr1:23,244,729-23,245,345
(GRCh38/hg38)
Size:
617 bases
Orientation:
Plus strand
chr1:23,571,222-23,571,838
(GRCh37/hg19)

Genomic View for RPL29P6 Gene

Genes around RPL29P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL29P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL29P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL29P6 Gene

Proteins for RPL29P6 Gene

Post-translational modifications for RPL29P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL29P6 Gene

Domains & Families for RPL29P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL29P6 Gene

Function for RPL29P6 Gene

Phenotypes From GWAS Catalog for RPL29P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL29P6 Gene

Localization for RPL29P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL29P6 Gene

Pathways & Interactions for RPL29P6 Gene

SuperPathways for RPL29P6 Gene

No Data Available

Interacting Proteins for RPL29P6 Gene

Gene Ontology (GO) - Biological Process for RPL29P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL29P6 Gene

Drugs & Compounds for RPL29P6 Gene

No Compound Related Data Available

Transcripts for RPL29P6 Gene

mRNA/cDNA for RPL29P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL29P6 Gene

No ASD Table

Relevant External Links for RPL29P6 Gene

GeneLoc Exon Structure for
RPL29P6
ECgene alternative splicing isoforms for
RPL29P6

Expression for RPL29P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL29P6 Gene

mRNA differential expression in normal tissues according to GTEx for RPL29P6 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL29P6 Gene:

RPL29P6
genes like me logo Genes that share expression patterns with RPL29P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL29P6 Gene

Orthologs for RPL29P6 Gene

Evolution for RPL29P6 Gene

ENSEMBL:
Gene Tree for RPL29P6 (if available)
TreeFam:
Gene Tree for RPL29P6 (if available)

No data available for Orthologs for RPL29P6 Gene

Paralogs for RPL29P6 Gene

No data available for Paralogs for RPL29P6 Gene

Variants for RPL29P6 Gene

Additional Variant Information for RPL29P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL29P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL29P6 Gene

Disorders for RPL29P6 Gene

Additional Disease Information for RPL29P6

Genetic Association Database
(GAD)

No disorders were found for RPL29P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL29P6 Gene

Publications for RPL29P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 44 58
  3. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58
  4. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 44 58

Products for RPL29P6 Gene

Sources for RPL29P6 Gene

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