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Aliases for RPL29P4 Gene

Aliases for RPL29P4 Gene

  • Ribosomal Protein L29 Pseudogene 4 2 3
  • RPL29_6_745 3
  • BA632C17A.1 3
  • AL450405.1 5
  • RPL29P3 3

External Ids for RPL29P4 Gene

Previous HGNC Symbols for RPL29P4 Gene

  • RPL29P3

Previous GeneCards Identifiers for RPL29P4 Gene

  • GC00U914385
  • GC06U900660
  • GC06P118426
  • GC06P118321

Summaries for RPL29P4 Gene

GeneCards Summary for RPL29P4 Gene

RPL29P4 (Ribosomal Protein L29 Pseudogene 4) is a Pseudogene.

Additional gene information for RPL29P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL29P4 Gene

Genomics for RPL29P4 Gene

GeneHancer (GH) Regulatory Elements for RPL29P4 Gene

Promoters and enhancers for RPL29P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I117481 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.8 -516.1 -516098 3.5 CLOCK FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 DCBLD1 RPL29P4 RNU6-253P PIR41328 ENSG00000282218
GH06I117906 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 0.2 -91.5 -91458 1.1 ZFP64 MZF1 ZNF76 SIN3A ZNF2 ZNF48 ZNF335 ZNF121 ZNF143 YY2 SLC35F1 RPL29P4
GH06I117919 Enhancer 1 Ensembl ENCODE 0.2 -78.9 -78863 1.2 PKNOX1 FOXA2 ZNF76 SIN3A ZNF335 GLIS2 EGR2 CEBPB REST ZEB2 GOPC SLC35F1 RPL29P4
GH06I117908 Enhancer 0.8 ENCODE 0.2 -90.8 -90795 0.1 ZNF76 SIN3A ZNF2 ZNF335 ZNF121 ZNF366 KLF7 SP3 ZBTB11 ZNF398 SLC35F1 RPL29P4
GH06I117951 Enhancer 0.6 ENCODE 0.2 -46.8 -46837 0.9 MAX SIN3A REST ZIC2 POLR2A CTBP2 EZH2 ZNF18 SLC35F1 RPL29P4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL29P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL29P4 Gene

Genomic Locations for RPL29P4 Gene
chr6:117,998,928-117,999,582
(GRCh38/hg38)
Size:
655 bases
Orientation:
Plus strand
chr6:118,320,091-118,320,749
(GRCh37/hg19)

Genomic View for RPL29P4 Gene

Genes around RPL29P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL29P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL29P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL29P4 Gene

Proteins for RPL29P4 Gene

Post-translational modifications for RPL29P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL29P4 Gene

Domains & Families for RPL29P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL29P4 Gene

Function for RPL29P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL29P4 Gene

Localization for RPL29P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL29P4 Gene

Pathways & Interactions for RPL29P4 Gene

SuperPathways for RPL29P4 Gene

No Data Available

Interacting Proteins for RPL29P4 Gene

Gene Ontology (GO) - Biological Process for RPL29P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL29P4 Gene

Drugs & Compounds for RPL29P4 Gene

No Compound Related Data Available

Transcripts for RPL29P4 Gene

mRNA/cDNA for RPL29P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL29P4 Gene

No ASD Table

Relevant External Links for RPL29P4 Gene

GeneLoc Exon Structure for
RPL29P4
ECgene alternative splicing isoforms for
RPL29P4

Expression for RPL29P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL29P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL29P4 Gene:

RPL29P4
genes like me logo Genes that share expression patterns with RPL29P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL29P4 Gene

Orthologs for RPL29P4 Gene

Evolution for RPL29P4 Gene

ENSEMBL:
Gene Tree for RPL29P4 (if available)
TreeFam:
Gene Tree for RPL29P4 (if available)

No data available for Orthologs for RPL29P4 Gene

Paralogs for RPL29P4 Gene

No data available for Paralogs for RPL29P4 Gene

Variants for RPL29P4 Gene

Additional Variant Information for RPL29P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL29P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL29P4 Gene

Disorders for RPL29P4 Gene

Additional Disease Information for RPL29P4

Genetic Association Database
(GAD)

No disorders were found for RPL29P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL29P4 Gene

Publications for RPL29P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Common variants in 22 loci are associated with QRS duration and cardiac ventricular conduction. (PMID: 21076409) Sotoodehnia N … Arking DE (Nature genetics 2010) 44 58
  3. Several common variants modulate heart rate, PR interval and QRS duration. (PMID: 20062063) Holm H … Stefansson K (Nature genetics 2010) 44 58
  4. Common genetic variation near the phospholamban gene is associated with cardiac repolarisation: meta-analysis of three genome-wide association studies. (PMID: 19587794) Nolte IM … Jamshidi Y (PloS one 2009) 44 58
  5. Common variants at ten loci modulate the QT interval duration in the QTSCD Study. (PMID: 19305409) Pfeufer A … Chakravarti A (Nature genetics 2009) 44 58

Products for RPL29P4 Gene

Sources for RPL29P4 Gene

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